Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0674 ATGCATAAACCATTGCATACGGCGTCGTTTTTAATATCACGCTTCAACTACCGTTATGCCAAGCCTCTCATCCCCACGCGCCTTTTCTCTCGCTATTCCCTTGAACAGTTCTCTGATGATGACTACGATTGTGATTTTGAAACCCACCAGGCATCGTCTACGGTGGCCAATGTGGATGAGTGGAAATGGAAGCTCAGCATGCTGCTACGCAGCGAGAAGGACCAAGAGATTGTATCTAGAGACAAAAAAGATAGGAGAGACTATGAACAGATAGCTAACCTTGCTAAAAGAATGGGACTTTACAGTGAGGTGTTTGGAAAAGTGATTGTTGCAAGTAAGGTGCCTCTTCCTAACTACCGGCCAGATTTGGATGACAAACGTCCACAAAGAGAGGTGGTGGTTCCACTAAGCTTGCAAAGGAGGGTTGAGGGTTTGTTGCAGGAATACCTTGACAGACTTCAGTTAAATTCTGAAAAGACAACTGAGAATCTGGATGATGTCAAGTCCATCAATCAGGTTAAAAATGTAGATATGGATGAAAATGCTGATTCTTATGTGGATGGTTCTGTTATGGAAAAGGTTCTCCAGAAGAAGAGTATGAGGATGCGTAATATGCAAAGAGCTTGGCAGGAATCACCTGAGGGAAGAAAGATGCTGGAGTTCCGGAGGTCTCTTCCATCATTCAAGGAGAAGGAAGGTTTACTTCAAGCTATAGCAAGGAATCAGGTGATAGTAATATCTGGAGAGACTGGCTGTGGTAAAACCACTCAGCTTCCTCAATATGTATTAGAGTCAGAAATAGAGTCTGGCCGTGGAGCATTTTGCAGCATTATTTGCACACAGCCTCGAAGGATATCTGCAATGGCAGTGTCAGAGAGAGTGTCAACTGAGAGAGGAGAGCCTCTTGGTGAAACAGTTGGTTTCAAAGTTCGATTAGAAGGAATGAAAGGGAAAAACACCCATCTGCTGTTTTGTACCAGTGGTATATTACTTCGAAGGTTGCTGAGCGATCGAAACCTGAATGGTATAACCCATGTTTTTGTTGATGAAATTCACGAGCGAGGCATGAATGAAGACTTTTTACTGATTGTGTTAAAGGACCTTCTTCCACGTCGTCGGGATTTAAGATTGGTTTTAATGAGTGCCACCTTGAATGCTGAGCTTTTTTCTAATTATTTCACAAGTGCGCCAACATTTCATATTCCGGGTTTCACCTACCCTGTCAGAGCTCACTTTTTAGAAGATGTTCTGGAAGTGACTGGATATAAGTTGACTTCCTTCAACCAAGTTGATGATTATGGTCAAGAGAAATTGTGGAAAACACAAAAACAGCTAGCACCACGCAAAAGAAAAAATCAGATCACTGCACTTGTCGAGGATGCTCTTTCTCAATCGAGCTTTGAGAACTATAGTTCCAAGGCACGTGACTCGCTAGCATCATGGGCACCTGACTGCATAGGTTTTAATCTCATTGAGGCTGTTCTATGCCATATATGTCGGAAGGAACGGCCAGGAGCTGTCTTGGTATTTATGACTGGGTGGGAGGATATAAGCTGCTTAAAAGATCAGCTTAAAGCACATCCTCTCTTAGGAGATCCAAATAGGATTCTGCTTCTAACATGTCATGGTTCAATGGCTACTTCAGAACAGAAACTCATATTTGAGAGGCCACCTCCTAATGTAAGGAAAGTAATACTTGCCACAAATATGGCAGAGGCAAGTATTACAATCAATGACATAGTTTTTAGAAGGGGTAGGGCTGGTCGTGTGCAGCCAGGAGAATGCTACCACCTTTACCCCAAATGTGTTTATGAAGCTTTTTCTGAATATCAACTTCCTGAGCTACTGAGAACACCCTTGAACTCTCTTTGCTTGCAAATTAAAAGTTTGCAGGTTGAGAGCATAGGGGAGTTCTTATCAGCAGCTTTGCAGGCACCAGAGCGACGAGCTGTCCAAAATGCTATTGATTTTCTCAAGTTGATTGGAGCATTAGATGAGAAAGAAAATCTTACCAATCTTGGGAAGTTGCTCTCAATGCTTCCGGTTGATCCCAAACTGGGAAAAATGTTAATAATGGGAGCTATATTTCGTTGCTTTGATCCTGTTCTTACAGTAGTTGCTGGCCTCAGTGTCAGGGATCCTTTTCTTTTGCCCCAAGACAAGAGGGATTTAGCAGGGACTGCGAAATCTAGGTTTTCTGCTAAAGATTACAGTGATCATATGGCCCTTGTTCGTGCATATGAAGGATGGAAAGATGCAGAAAGAGAAGGATCTGCTTACGAATACTGCTGGAGAAATTTCCTCTCTGCCCAAACTCTTCAGGCTATCCATTCACTTCGGAAGCAGTTTAGCTTTATCCTGAAAGACGCTGGTTTGGTTGAGTCAGATTCAAGCATTAACAATAAATTGAGTCACAATCAGTCTCTAGTTCGCGCAGTCATTTGTGCTGGACTTTTTCCTGGCATAGCATCAGTAGTGCACAGGGAGACATCCATGTCATTTAAAACAATGGACGACGGCCAGAATTCAGTGAATGCACGTTACCAGACCATTCCTTACCCATGGCTGGTTTTTGGTGAAAAAGTGAAGGTCAATGCTGTTTTCATTCGTGATTCCACTGGTGTATCTGATTCAATACTTATCCTTTTTGGTGGTGCTCTAAGTAATGGGATACAGGCTGGGCATCTTCGAATGTTAGATGGGTATGTTGACTTCTTCATGGATCCCAATTTAGCTGACTGCTATTTGAAGCTTAAGGAAGAGCTTGATAAGCTTCTCCAAAAGAAGCTAGAAGATCCTAGCATTGACATTCACAAGGAAGGGAAGTACTTGATGCTTGCTGTGCAGGAACTAGTCTTAGGGGATCAATGTGAGGGAAGATTTGTGTTTGGCCGAGAAAGCAGAAAGCCTAGGGCCTCCAATGATGAGAATAAATTCACAAAAGATGGGACAAACCCCAAAAGCTTGCTTCAAACACTGTTGATGAGAGCAGGGCACTCCCCTCCTAAATACAAAACAAAACATCTCAAGACAAATGAGTTTAGGGCACTGGTGGAGTTTAAAGGAATGCAGTTTGTTGGCAAGCCCAGGAGAAACAAGCAACTTTCAGAAAGGGATGCTGCTATAGAGGCATTGGCTTGGTTGACTCACACCTCTGAAAATAATCAGCATGAAGATGACAAGACTCCTCCTGATGTCACTGACAACATGCTAAAACTGCTAGGAAGGCGTAGAAAATCAAAGGGACGGTAA 3252 0.429 MHKPLHTASFLISRFNYRYAKPLIPTRLFSRYSLEQFSDDDYDCDFETHQASSTVANVDEWKWKLSMLLRSEKDQEIVSRDKKDRRDYEQIANLAKRMGLYSEVFGKVIVASKVPLPNYRPDLDDKRPQREVVVPLSLQRRVEGLLQEYLDRLQLNSEKTTENLDDVKSINQVKNVDMDENADSYVDGSVMEKVLQKKSMRMRNMQRAWQESPEGRKMLEFRRSLPSFKEKEGLLQAIARNQVIVISGETGCGKTTQLPQYVLESEIESGRGAFCSIICTQPRRISAMAVSERVSTERGEPLGETVGFKVRLEGMKGKNTHLLFCTSGILLRRLLSDRNLNGITHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLVLMSATLNAELFSNYFTSAPTFHIPGFTYPVRAHFLEDVLEVTGYKLTSFNQVDDYGQEKLWKTQKQLAPRKRKNQITALVEDALSQSSFENYSSKARDSLASWAPDCIGFNLIEAVLCHICRKERPGAVLVFMTGWEDISCLKDQLKAHPLLGDPNRILLLTCHGSMATSEQKLIFERPPPNVRKVILATNMAEASITINDIVFRRGRAGRVQPGECYHLYPKCVYEAFSEYQLPELLRTPLNSLCLQIKSLQVESIGEFLSAALQAPERRAVQNAIDFLKLIGALDEKENLTNLGKLLSMLPVDPKLGKMLIMGAIFRCFDPVLTVVAGLSVRDPFLLPQDKRDLAGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSAYEYCWRNFLSAQTLQAIHSLRKQFSFILKDAGLVESDSSINNKLSHNQSLVRAVICAGLFPGIASVVHRETSMSFKTMDDGQNSVNARYQTIPYPWLVFGEKVKVNAVFIRDSTGVSDSILILFGGALSNGIQAGHLRMLDGYVDFFMDPNLADCYLKLKEELDKLLQKKLEDPSIDIHKEGKYLMLAVQELVLGDQCEGRFVFGRESRKPRASNDENKFTKDGTNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQFVGKPRRNKQLSERDAAIEALAWLTHTSENNQHEDDKTPPDVTDNMLKLLGRRRKSKGR 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0674 1083 Gene3D - 582 610 IPR027417 -
Lal1g0674 1083 Gene3D - 488 581 IPR027417 -
Lal1g0674 1083 Gene3D - 633 735 - -
Lal1g0674 1083 Gene3D - 174 403 IPR027417 -
Lal1g0674 1083 Coils Coil 150 170 - -
Lal1g0674 1083 Pfam Helicase conserved C-terminal domain 493 580 IPR001650 -
Lal1g0674 1083 MobiDBLite consensus disorder prediction 1051 1083 - -
Lal1g0674 1083 SUPERFAMILY dsRNA-binding domain-like 979 1059 - -
Lal1g0674 1083 CDD SF2_C_RHA 479 599 - -
Lal1g0674 1083 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 810 886 IPR011709 -
Lal1g0674 1083 Gene3D - 966 1054 - -
Lal1g0674 1083 PANTHER ATP-DEPENDENT RNA HELICASE 38 582 - -
Lal1g0674 1083 PANTHER ATP-DEPENDENT RNA HELICASE 583 978 - -
Lal1g0674 1083 PANTHER DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH5, MITOCHONDRIAL 38 582 - -
Lal1g0674 1083 PANTHER DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH5, MITOCHONDRIAL 583 978 - -
Lal1g0674 1083 MobiDBLite consensus disorder prediction 1053 1075 - -
Lal1g0674 1083 CDD DEXHc_RHA-like 241 401 - -
Lal1g0674 1083 SMART ha2_5 653 744 IPR007502 GO:0004386
Lal1g0674 1083 Pfam Double-stranded RNA binding motif 986 1048 IPR014720 -
Lal1g0674 1083 SMART DRBM_3 986 1049 IPR014720 -
Lal1g0674 1083 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 234 759 IPR027417 -
Lal1g0674 1083 Pfam Helicase associated domain (HA2) 654 740 IPR007502 GO:0004386
Lal1g0674 1083 SMART ultradead3 222 416 IPR014001 -
Lal1g0674 1083 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 235 402 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0674 Lal-Chr1 4394957 4408933 Transposed