Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0669 ATGGGGATCCAAACTATGGGGTCTCAAGCTGGTGGGGGTGGAGATAGTAATGGAAAAAGGTCACAAGTACAGCCTCTGGTCCAGCAAAACTCGATGTACAATTTCACACTCGACGAAATTCAGAATCATTTAGGCGATTTAGGGAAGCCATTAAGTACTGTGAACATTGATGAGCTTCTAAAAAATGTATTGGCCGTTGAGACAAATCAGTCGGTGGCTTTGGACATTGAGGGCACACCGCAAGTTAATCAAGCTGAGCTTCAGCATCAAGGAAGTCCGTCATTAACTGATGCACTGAGCAAGAAGACAGTCGACAAGGTTCGGAGGAATATCCAACAAAGCAAAAATAATAACGAGAATAAGTCTCAAGAAAGACAACCTACCTTGGGAGAGATGACATTGGAGGATTTCTTGGTGAAAGCAGGTATCGTTGCAGAAGGATCGTCTAATGAAAAAAATACTAGTAGTATAGCTGCCATTGATTCAAATGTAGCAATTCAGCAGTTTCCTCCGCAAGGTCAGTGGATGTCGTATCCACAACCACAATATCAGCATCAACAACAAAGTTTAATGGGGATTTACATACCTGGCCAGGGTATAGCACAGCCGTTACACACGAGGGATGGTGCTTCAGTGGACGTTGTTCCATTTGCCGATAATCAGGTGCCATTGCCTTCACCTTTGATTGGAACAATGTCAGATACGCAGACACCTGGAAGAAAAAGGAACACTCCAGAGGACATGGTGGAAAAGAGTGTCGAGAGGCGGCAAAAGAGGATGATCAAGAATCGGGAATCTGCTGCTCGTTCAAGAGCAAGGAAGCAGGCATACACAAATGAATTGGAGAATAAAGTCTCCCGTCTGGAAGAGGAAAACGAAAGACTGAGGAAACAAAAGCAGCTAGAGAAGATATTGCCATGCGCACCGCGTCCTGAACCTAAATATCAACTTCGCCGAATAGCATCAGCTCCATTCTGA 978 0.4458 MGIQTMGSQAGGGGDSNGKRSQVQPLVQQNSMYNFTLDEIQNHLGDLGKPLSTVNIDELLKNVLAVETNQSVALDIEGTPQVNQAELQHQGSPSLTDALSKKTVDKVRRNIQQSKNNNENKSQERQPTLGEMTLEDFLVKAGIVAEGSSNEKNTSSIAAIDSNVAIQQFPPQGQWMSYPQPQYQHQQQSLMGIYIPGQGIAQPLHTRDGASVDVVPFADNQVPLPSPLIGTMSDTQTPGRKRNTPEDMVEKSVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKQLEKILPCAPRPEPKYQLRRIASAPF 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0669 325 MobiDBLite consensus disorder prediction 225 251 - -
Lal1g0669 325 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 258 273 IPR004827 GO:0003700|GO:0006355
Lal1g0669 325 SUPERFAMILY Leucine zipper domain 255 300 IPR046347 GO:0003700|GO:0006355
Lal1g0669 325 Pfam bZIP transcription factor 255 298 IPR004827 GO:0003700|GO:0006355
Lal1g0669 325 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 22 323 IPR043452 GO:0003700|GO:0045893
Lal1g0669 325 SMART brlzneu 251 319 IPR004827 GO:0003700|GO:0006355
Lal1g0669 325 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 253 298 IPR004827 GO:0003700|GO:0006355
Lal1g0669 325 Gene3D - 253 306 - -
Lal1g0669 325 Coils Coil 104 124 - -
Lal1g0669 325 CDD bZIP_plant_BZIP46 255 309 - -
Lal1g0669 325 MobiDBLite consensus disorder prediction 1 22 - -
Lal1g0669 325 PANTHER ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 2-RELATED 22 323 - -
Lal1g0669 325 Coils Coil 271 305 - -
Lal1g0669 325 PRINTS cAMP response element binding (CREB) protein signature 250 266 - -
Lal1g0669 325 PRINTS cAMP response element binding (CREB) protein signature 268 288 - -
Lal1g0669 325 PRINTS cAMP response element binding (CREB) protein signature 288 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0669 Lal-Chr1 4376654 4379867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0669 24 325 bZIP Transcription Factor Family AT3G56850 50.814 1.31e-88 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal1g0669 bZIP_1 1.3e-12 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0669 1 4376654 4379867 Lal9g0649 9 4468821 4473423 LSH