Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0660 ATGTCTCCATCAATGAAATCGAAATCCAAGTCGAAGGAGAAGGCCTCTGCAAGGGCCAGGAAGGACCAACAGAAGTGTTCTCCAAAGACTTCTGTGACTACTAATCATGGCAGTGGCATTCCTACTACTGCATACAATCCCATCTCTGGAACATTTCATACCTTAGAAACATCATTAGTTGCTTCTTCAGCTCCACTTCATGAAAACAGTCATTTCCTAAAAATAGATGACATAGATGATCATTCTAGTAGTCCTCGAGGAACGGTGTCTGAGTGTGATTCATTTTCTAACAATGGAAGCTGCTCTGGTGAATCAGAAGACCATAAAGAGAAAGTAGCAAACTCTTCTATGCGGCCGGATACTATACCTGGTTGTGATAATGAGAGAAGGGAGAAGATCCGGATGAAGAATGAGAGAAAGCACCAGAGGCAGAGGGAAAGGAGAGCTCAGGAGTTGCATGACCGTTGCAGTGGCTATCTAATGTCAAGGAAGCTTGAAGCACTTTCGCAGGAGTTAGTGGCGATGGGCTTCTCTTTTGAGCGAGCAACATTGGCATTGATGTTAAATGATGGCAAATTGGAGGAATCAGTATCCTGGCTCTTCGAAGGAAGTGAAGACAAATCGTGTACCAAGGATACTGCTACCAATCTTCTAAATGAAGGTAATTTGAAAATTAACATAAGTAAAGAGCTTTCGCAGATATCTGCTATGGAAGTGAGATACAATTGTTCAAAGCAAGAGGTTGAAAGAGTAGTTATTGCCTGTGAAGGTGATATTCAGAAAGCAGAAAACACCTTAAAATCATCGAAGCACGAGTCTCTTGTGATCCAACCAAAGTCAGAAGATTCTGCTCAAAATAATAGCTTAGTGAGATCACAAGGGTTACCAACAGCTTCAGTTTCAATGCCACAAAGAGGGAATGAATATGACTTTTACTATTCCAAAGTAGGTACTGGTGCTTCTATGCTCCTAGATCCTGAAAGCAAGAATCTGCAGTCTCTACACTTGAATCATCCAAATGAACCGACCGAAAAAAGATGGGATGTTACTGGATCAAACCCTTCTAATATGTTAATGATGTTGCCATCGATGCAAGCACCGTCTTCATTTGCTAAAGTAGATGCCAAGCCTAGTGCCCTTTGGAATGAAGGAAGAATGATTCAACAAGGATTTGGAAAGGAGCAATTAGTCATGATGCAGCAGCCACAATTCAAAAATGCCAAGCAAAATTCTATTGCTTCTATAAATGTCTTATCTTCAGGGACAGAAGGGTGGTATGTAAACAATATTAGAGATGCTGAAAATGCAAGGTCAAATGGGAGGTTATTACAATATCGTGATACAGGAAATGCAGGTACACAACATATAGAGGAATTTTGTCAAGCTCCTTATAACGAATATTCGAATGTCTTCGGGCCAATCAACAACTTATCAGCCAGGACAGGAGGTTTCTATAAGGCAATGCGCGCATCGTCACTATCGCCTTCAGCTACAATCCGTCCTAAGCATCAGGGTTCATGGAGCGCGAGTGCATCTTCGCCAGAGCTTACATTTCCACCATCCCTTGGACTATTTTCTGGTCATCATAATGCAGCAGACAGAACATTATTCAGCTCACATTCACATGTTGATTGGAACAACGGCGGCTTGATGCCAAAAATCGACTACACCAATATAGATTGGACTTTTTATATGTACCCGAAATCAGGTGGATTGTGGTTCGGGATCTCATCATTTTTAAGAAACAGTTCTGGGAATAAGATGATAGGCAGTTCTGCATGCATGAGCAGATTACAAAATGGTGGCATGGTTAAGGAATCTTCATCATCTTCTGTTTTGAGGGAGTGGACAACTCCTTTTGCTGGGAAGGACATGTTCAGTGTTCCTAGGCAGCTTGTTACCCCTACTCCTCTCTAA 1917 0.4178 MSPSMKSKSKSKEKASARARKDQQKCSPKTSVTTNHGSGIPTTAYNPISGTFHTLETSLVASSAPLHENSHFLKIDDIDDHSSSPRGTVSECDSFSNNGSCSGESEDHKEKVANSSMRPDTIPGCDNERREKIRMKNERKHQRQRERRAQELHDRCSGYLMSRKLEALSQELVAMGFSFERATLALMLNDGKLEESVSWLFEGSEDKSCTKDTATNLLNEGNLKINISKELSQISAMEVRYNCSKQEVERVVIACEGDIQKAENTLKSSKHESLVIQPKSEDSAQNNSLVRSQGLPTASVSMPQRGNEYDFYYSKVGTGASMLLDPESKNLQSLHLNHPNEPTEKRWDVTGSNPSNMLMMLPSMQAPSSFAKVDAKPSALWNEGRMIQQGFGKEQLVMMQQPQFKNAKQNSIASINVLSSGTEGWYVNNIRDAENARSNGRLLQYRDTGNAGTQHIEEFCQAPYNEYSNVFGPINNLSARTGGFYKAMRASSLSPSATIRPKHQGSWSASASSPELTFPPSLGLFSGHHNAADRTLFSSHSHVDWNNGGLMPKIDYTNIDWTFYMYPKSGGLWFGISSFLRNSSGNKMIGSSACMSRLQNGGMVKESSSSSVLREWTTPFAGKDMFSVPRQLVTPTPL 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0660 638 PANTHER DOMAIN PROTEIN, PUTATIVE-RELATED 1 635 - -
Lal1g0660 638 MobiDBLite consensus disorder prediction 7 25 - -
Lal1g0660 638 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 163 203 IPR015940 -
Lal1g0660 638 PANTHER UBIQUITIN-ASSOCIATED/TRANSLATION ELONGATION FACTOR EF1B PROTEIN 1 635 - -
Lal1g0660 638 MobiDBLite consensus disorder prediction 26 42 - -
Lal1g0660 638 MobiDBLite consensus disorder prediction 275 301 - -
Lal1g0660 638 MobiDBLite consensus disorder prediction 77 150 - -
Lal1g0660 638 MobiDBLite consensus disorder prediction 1 42 - -
Lal1g0660 638 Gene3D - 161 211 - -
Lal1g0660 638 MobiDBLite consensus disorder prediction 87 102 - -
Lal1g0660 638 Coils Coil 125 145 - -
Lal1g0660 638 SUPERFAMILY UBA-like 167 207 IPR009060 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0660 Lal-Chr1 4321479 4323395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0660 7 289 EF-hand Containing Proteins AT5G12120 47.719 9.11e-77 255
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0660 1 4321479 4323395 Lal2g0739 2 4666600 4669907 LSH