Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0643 ATGGAAACTACCCATTTGTTGATTTTACTTCTTGGACTAACACTAGCTACATTTTTTGTCATCCTTGCATTTTATGTCTCATACAGGATAAGAAAATCAAAACTTGAGAGTGGAAAAGACATAGAAAGTTCAGAACAGAATAATCAGGAAGAAGATATAATTCAGAAGGAGGACTTGATCATTTTTGAAGGTGGAGAGGACCTTACAATATGTGATATATTGGATGCTCCAGGTGAAGTGATTGGAAAATCAAATTATGGGACACTATATAAGGCCTTGTTGCAAAGGAGCAACAAAGTGAGGTTGTTGAGGTTTCTGAGGCCAATTTGTACTACAAGAGCTGAAGAATTGGATGAAATTGTTCAGTTTATTGGAAGGATAAGGCACCCTAATTTGGTACCTCTTCTTGGATTTTACACTGGGCCAAGGTTTGAGAAGCTTCTAGTTCATCCTTTTTATAGACATGGGAATTTGACTCAGTTCATAAGAGATGGAAATGGAGAGTGTTACAAATGGTCTAACATATACAGAATATCCTATGGTATAGCCAAAGGATTAGAGCATCTTCACACGGGACAGGAGAAGCGTATTATCCACGGAAATCTCAAGTCTAAAAACATCCTTTTGGATCATTCGTACCGACCATACATCTCAGATTCAGGCCTCCATCTTCTGTTGAATCCTACCGCTGGCCAAGAAATGCTTGAAACTTCAGCTGCTCAAGGTTATAAGGCGCCCGAGCTTATCAAAATGAAGGATGCTAGTGAAGAAACTGATATATATAGCCTCGGTGTTATCTTTCTGGAATTACTTTCAGGAAAGGAACCAATAAATGAGCACCCTACTCCCGATGAGGATTTCTATTTGCCGAATTTCATGAGAAATGCTGTCCTCGGACAAAGGATTTCTGATTTATACCATCCAGCCATTCTTCTCGGAAACAGCAGAGACGATAGAGTTCCGGTTTCAGAAGAATGCATTCTCAAATTTTTTCAACTTGCTTTGGCTTGTTGCTCCCATTCCCCTTCAATCAGGCCTAACATAAAGCAGGTCCTTATGAAGCTTGAAGAAGTTGCAGGCTAG 1083 0.3961 METTHLLILLLGLTLATFFVILAFYVSYRIRKSKLESGKDIESSEQNNQEEDIIQKEDLIIFEGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSNKVRLLRFLRPICTTRAEELDEIVQFIGRIRHPNLVPLLGFYTGPRFEKLLVHPFYRHGNLTQFIRDGNGECYKWSNIYRISYGIAKGLEHLHTGQEKRIIHGNLKSKNILLDHSYRPYISDSGLHLLLNPTAGQEMLETSAAQGYKAPELIKMKDASEETDIYSLGVIFLELLSGKEPINEHPTPDEDFYLPNFMRNAVLGQRISDLYHPAILLGNSRDDRVPVSEECILKFFQLALACCSHSPSIRPNIKQVLMKLEEVAG 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0643 360 Gene3D Transferase(Phosphotransferase) domain 1 154 360 - -
Lal1g0643 360 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 1 358 - -
Lal1g0643 360 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 358 - -
Lal1g0643 360 SUPERFAMILY Protein kinase-like (PK-like) 78 355 IPR011009 -
Lal1g0643 360 ProSiteProfiles Protein kinase domain profile. 75 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0643 360 Gene3D Phosphorylase Kinase; domain 1 75 152 - -
Lal1g0643 360 Pfam Protein tyrosine and serine/threonine kinase 78 355 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0643 Lal-Chr1 4187090 4190110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0643 1 358 Carbohydrate Esterase AT5G61570 54.743 2.09e-133 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal1g0643 PK_Tyr_Ser-Thr 2.9e-31 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0643 1 4187090 4190110 Lal2g0701 2 4283963 4286395 LSH