Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0622 ATGGATTTTGTGTTATCTTTGAAACCCCATAGTCAGAGTGTGTTTCTGAAATCAACTTCTTCATCTTTCTTCCTCCCTCTCTCTCTTCCTCTCAAATTCCACTCTCTTCGTCCTCTCTCTGCTTTGAAACACGCCAAGATTCACTGCGAGTTTGAAAGAAGAATCAATGGCGCTCTTTCTGATGACTCTGACCCTCGCTTTCTTGATAGGCAAAAAGCACTGGAAGCTGCGATGAATGATATAAACAACTCATTTGGAAAGGGAAGTGTTACAAGATTGGGCAGTGCCGGTGGAGCTTTGGTTGAAACTTTTCCCAGTGGCTGTTTGACATTAGACTGTGCTTTAGGTGGTGGTCTTCCAAAAGGAAGAATTATAGAGATATTTGGACCAGAGAGCAGTGGTAAAACAACCCTTGCACTCCATGCCATTGCAGAAGTGCAGAAGTTGGGTGGTAATGCTGTGCTTGTTGATGCTGAGCACGCTTTTGATCCAGCATATTCTAAAGCATTGGGAGTGGATGTAGAAAATTTAATTGTCTGCCAACCTGATCATGGAGAGATGGGTCTTGAGATCGCAGATCGCATGTGCAGATCTGGGGCTGTAGATCTCATCTGTGTTGATTCTGTCTCAGCTCTCACTCCACGAGCAGAAATTGAAGGTGAGATTGGAATGCAGCAAATGGGATTGCAGGCTCGTCTTATGAGCCAAGCATTGCGTAAGATGTCTGGAAATGCCTCTAAAGCTGGTTGTACTCTTATATTTTTGAATCAAATAAGATTTAAGATTGGTGTCTATTATGGAAATCCAGAAGTGACAAGTGGTGGAATTGCATTGAAGTTCTTCGCGTCACTTCGACTTGAAATTCGTTCTATAGGGAAGATAAAGTCTGCTAAAGGAGATGAAGAAATTGGCCTTAAAGTTCGTGTAAGAGTGCAAAAGAGCAAGGTATCAAGGCCATACAAAATAGCTGAGTTCGAGATTATATTTGGGGAGGGAGTCAGTAAGCTGGGTTGCATTTTAGATTGTGCAGAAATGATGGATGTTGTCTTAAAGAAAGGCTCTTGGTATAGCTATGGGGACCATCGGTTGGGGCAGGGAAGAGAAAAGGCACTACAGTACCTAAAGGAGAACACACATCTTTTAGAAGAAATTGAAAAGGTAGTTCGGTCTTCCTTGATAGATGGAACTAACCAAACAAGCCATGCATACACGAAGAATAGTCCATTACCCTATCAAGATGATGATATATTTGAGGAAAGTCAATGA 1266 0.4218 MDFVLSLKPHSQSVFLKSTSSSFFLPLSLPLKFHSLRPLSALKHAKIHCEFERRINGALSDDSDPRFLDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIIEIFGPESSGKTTLALHAIAEVQKLGGNAVLVDAEHAFDPAYSKALGVDVENLIVCQPDHGEMGLEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRFKIGVYYGNPEVTSGGIALKFFASLRLEIRSIGKIKSAKGDEEIGLKVRVRVQKSKVSRPYKIAEFEIIFGEGVSKLGCILDCAEMMDVVLKKGSWYSYGDHRLGQGREKALQYLKENTHLLEEIEKVVRSSLIDGTNQTSHAYTKNSPLPYQDDDIFEESQ 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0622 421 TIGRFAM tigrfam_recA: protein RecA 69 389 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lal1g0622 421 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 333 IPR027417 -
Lal1g0622 421 PRINTS RecA protein signature 157 186 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lal1g0622 421 PRINTS RecA protein signature 191 220 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lal1g0622 421 PRINTS RecA protein signature 229 258 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lal1g0622 421 PRINTS RecA protein signature 274 302 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lal1g0622 421 PRINTS RecA protein signature 309 338 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lal1g0622 421 PRINTS RecA protein signature 363 380 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lal1g0622 421 ProSiteProfiles RecA family profile 1. 100 258 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Lal1g0622 421 MobiDBLite consensus disorder prediction 399 421 - -
Lal1g0622 421 Pfam recA bacterial DNA recombination protein 72 334 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lal1g0622 421 SUPERFAMILY RecA protein, C-terminal domain 334 390 IPR023400 -
Lal1g0622 421 CDD recA 69 392 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lal1g0622 421 ProSiteProfiles RecA family profile 2. 263 338 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Lal1g0622 421 Hamap Protein RecA [recA]. 70 395 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lal1g0622 421 PANTHER MITOCHONDRIAL DNA REPAIR PROTEIN RECA HOMOLOG 67 407 - -
Lal1g0622 421 Gene3D - 99 403 IPR027417 -
Lal1g0622 421 ProSitePatterns recA signature. 277 285 IPR020584 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Lal1g0622 421 PANTHER RECA 67 407 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lal1g0622 421 SMART AAA_5 121 292 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0622 Lal-Chr1 3969913 3977622 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0622 1 3969913 3977622 Lal2g0667 2 4006949 4013504 LSH