Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0610 ATGTCATTCTATTCCTCATGGTTATGTTTCTCTGTTCTATGGGCAGTGACATTTCTACTGAACCAAGTGCATGGTTTGATTATTCAGTCAAACCAAGCAGAACAAGGATGTGATTTTTCTATTGGTAGTTGGGTTCTTGATTCACACTACACTTTTTATGATGCTTCAAGAGGTTGTCCATTTTTAGGAAAGGGATTTGATTGTATTGGAAATGGTAGACATGATCTGAACTACCTTAAGTATAGATGGAAGCCCTCTCATTGTAACCTTCCAAGGTTTGATGGCAAGAAATTCTTGGAGAGATACAGAGGAAAGAAGATAATGTTTGTAGGGGACTCACTAAGCAACAATATGTGGCAATCACTCACTTGTTTGCTTCACATTTCAGTCCCAAACTCAGATTACACCTTAACAAGTCAAACAAAGCAACTCTCTGTATTCTTTTTTCCGGAATATCAAGCTTCAATAATGTGGTTGAAAAATGGGTTCCTGGTGGATGTAGTTCATGATAAAGAAAAAGGTAGAATTGTAAAATTGGACTCTATTAAATCTGGGGACCAGTGGAAAGGAGTAGATACTTTGATTTTCAATACCTATCATTGGTGGAATCATATAGGAGAGTCTCAAATACACTTTGAATTAGGCAATGAAATAGTCAACATGGACAAAATGGAAGCTTACAGGATTGGGTTAACCACTTGGGCTAAATGGATAGACTCTAACATTGATCCTTCAAAGACTAGTGTTTTGTTCCAAGGAATTGCTGCAACCCATTCTGATGGGAAGGGATGCCAAGGACAAACAACACCACTGCAAGGATCACAGCCACCATATCCCTGTGTGGATATTGTAAAGAGTACTCTGAGGAGCATGAGAAATCCAGTTCATTTGCTTGACATTACTCTGCTCACACAGTTGAGAATAGATGGCCACCCTTCGATTTACAACGGCGGTGGTGCTTCTGATGTGGATTGCAGTCACTGGTGTCTAGCTGGTGTTCCTGATACTTGGAACCTAATCTTGTATGCTGCTTTGATAGGAAGATAA 1047 0.3945 MSFYSSWLCFSVLWAVTFLLNQVHGLIIQSNQAEQGCDFSIGSWVLDSHYTFYDASRGCPFLGKGFDCIGNGRHDLNYLKYRWKPSHCNLPRFDGKKFLERYRGKKIMFVGDSLSNNMWQSLTCLLHISVPNSDYTLTSQTKQLSVFFFPEYQASIMWLKNGFLVDVVHDKEKGRIVKLDSIKSGDQWKGVDTLIFNTYHWWNHIGESQIHFELGNEIVNMDKMEAYRIGLTTWAKWIDSNIDPSKTSVLFQGIAATHSDGKGCQGQTTPLQGSQPPYPCVDIVKSTLRSMRNPVHLLDITLLTQLRIDGHPSIYNGGGASDVDCSHWCLAGVPDTWNLILYAALIGR 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0610 348 Pfam PMR5 N terminal Domain 36 89 IPR025846 -
Lal1g0610 348 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 9 347 IPR029962 GO:0016413
Lal1g0610 348 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 90 343 IPR026057 GO:0016740
Lal1g0610 348 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 9 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0610 Lal-Chr1 3889419 3891746 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0610 1 3889419 3891746 Lal2g0644 2 3864414 3867552 LSH
Lal1g0610 1 3889419 3891746 Lal9g0557 9 3782844 3785048 LSH