Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0609 ATGTCTGAATGCTCGACACAATCAGCTAAGGATGATCTTTTGTTTCTTAATGGGCATCTTCTGGTTATTACTCTTGCAATCAATAGGGAAATTGGGAACTATTCTAAGCTTTGTTGTTTTTGTGACTCCGATATTTTATGTGAAACAATTGCCATTGTTGCTTCCGCCAAACCCCATTTAGTGAAAGGAAATGGAAAGAATTTTGGTAAAATGGGAGGAGGGTTTAGAGTGCTTCACTTGGTCAGGCCATTTCTCTCTTTTCTTCCTGAAGTTCAGACTGCTGACAGGAAAGTGCCATTTAGGGAAAAGGTCATATATACTGTGATTTCTCTGTTCATTTTCCTGGTTTGTAGTCAGCTCCCTCTGTATGGAATACACTCAACAACAGGTGCAGATCCATTCTATTGGATGCGTGTTATCCTTGCTTCAAATCGTGGAACTGTTATGGAGCTTGGAATCACCCCCATTGTTACTTCTGGATTGGTGATGCAACTTTTGGCTGGGTCAAAGATCATTGAAGTTGACAACAATGTTCGTGAGGATCGTGCTCTTTTGAATGGTGCGCAGAAGCTACTCGGCATCTTGATAGCTGTTGGGGAAGCTGTTGCCTATGTTCTTTCTGGGATGTATGGTAGTGTGGGCCAACTTGGAGTAGGAAATGCAATCCTCATCATTATTCAGCTCTGTTTTGCGGGTATCATCGTGATATGTCTGGATGAGCTCCTTCAAAAAGGATATGGTCTGGGTTCTGGAATTTCTCTATTCATTGCCACTAATATCTGTGAAACCATTATATGGAAGGCATTTAGTCCCACCACCATTAACAGTGGACGTGGAGCTGAATTTGAGGGTGCTGTTATTGCTCTATTCCATTTATTGATAACTAGAACAGACAAGGTTCGAGCGCTTCGTGAGGCATTTTACCGGCAGAATCTTCCCAATGTAACAAATCTGCTTGCTACTGTCTTGATCTTCCTAATTGTGATATACTTCCAAGGTTTCCGAGTGGTTTTGCCTGTAAGATCAAAGAATGCCCGTGGGCAGCAGGGTTCATATCCAATCAAACTGTTTTATACCTCCAACATGCCTATTATTCTTCAATCTGCTCTTGTTTCCAATCTCTACTTCATTTCCCAGCTGCTACACAGAAAGTACAGTGGGAACTTCTTGGTGAATCTATTGGGAAAATGGAAGGATTCTGAATATGGAGGTGGCCACTCTATCCCTGTTGGTGGTATTGCATACTACATCACTGCCCCATCCAGCTTAGCTGATATGGCAGCCAATCCTTTCCATGCACTGTTCTATCTTGTGTTTATGCTATCAGCTTGTGCCTTGTTCTCTAAAACTTGGATTGAAGTCTCTGGTTCATCTGCTAGAGATGTTGCCAAACAGCTGAAGGAACAACAAATGGTAATGCCTGGACACCGTGAATCAAACTTACAGAAGGAGCTGAACCGATATATTCCCACTGCTGCTGCATTTGGTGGCATCTGTATTGGTGCCCTGACAGTGTTGGCAGATTTCATGGGTGCAATTGGTTCAGGAACAGGAATATTACTTGCAGTAACAATCATCTATCAGTACTTCGAGACGTTTGAGAAGGAGAGAGCCAGCGAGCTCGGCTTCTTTGGTTTCTAA 1641 0.4272 MSECSTQSAKDDLLFLNGHLLVITLAINREIGNYSKLCCFCDSDILCETIAIVASAKPHLVKGNGKNFGKMGGGFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIIQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICETIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSALVSNLYFISQLLHRKYSGNFLVNLLGKWKDSEYGGGHSIPVGGIAYYITAPSSLADMAANPFHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIPTAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0609 546 Pfam Plug domain of Sec61p 112 146 IPR019561 -
Lal1g0609 546 TIGRFAM 3a0501s007: preprotein translocase, SecY subunit 101 537 IPR002208 GO:0015031|GO:0016020
Lal1g0609 546 PANTHER F9K20.24 PROTEIN 71 546 - -
Lal1g0609 546 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 71 546 IPR002208 GO:0015031|GO:0016020
Lal1g0609 546 Pfam SecY 147 529 IPR002208 GO:0015031|GO:0016020
Lal1g0609 546 SUPERFAMILY Preprotein translocase SecY subunit 80 536 IPR023201 -
Lal1g0609 546 ProSitePatterns Protein secY signature 1. 147 166 IPR030659 -
Lal1g0609 546 Gene3D SecY subunit domain 79 544 IPR023201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0609 Lal-Chr1 3881166 3884223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0609 71 546 Miscellaneous Gene Families AT2G34250 93.067 0.0 909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0609 1 3881166 3884223 Lal1g0609 1 3881166 3884223 ECH
Lal1g0609 1 3881166 3884223 Lal9g0555 9 3760541 3764573 LSH