Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0597 ATGCCTTCTTCTCCAAAATCCTCCACCTACTACGCCCGCCAAGCCGCCACCTCTCGCAGATCCACCGTCATCGTCGCCGTCATTATCATCACAATCATCGGAATCGTTGCTCTTCTCAGAGGCGGCTCCCGGTGTCTCAGCCCACGCCCCAGATCGGTTCGGGTGGTTTGGGAGCATGGTAGGAGTAATGAGAATCTTGGGGTTGGGACTAATAGGCATAAAGTTATGGGCTTTGTGGGTATTCAAACTGGATTCGGATCATTGGGTAGGAGAAAAGCGTTGAGGAAGACTTGGTTTCCCTCTGATCAAGAAGGCCTTCAACGCTTGGAAGAAGCCACTGGATTGGCTTTTAGGTTCATCATCGGTAAAACAAGAGATAGAGCAAAGATGTCTGCACTTCAGAAGGAAATAGCAGAGTATGATGATTTCCTTCAGTTGGATATCGAAGAGGAGTACAGTAAGCTCCCATACAAAACGCTAGCTTTCTTCAAAGCTGCTTATGCACTTTTCGATGCTGAGTATTACGTCAAAGCTGATGATGACATATATTTAAGGCCAGATCGTCTTTCAATACTACTGGCAAAAGAGCGATCTCACACTCAGTCTTACATAGGATGCATGAAAAAGGGGTCTGTTATTACTGACCCGGAACTTAAATGGTATGAACCACTATCGTATTTGCTTGGAAAGGAGTATTTTCTTCATGCTTATGGTCCTATATATGTTCTTTCTGCTGATGTTGTTTCAAGCTTGGTTGCGCTTAGGAATGACAGTTTTCGGATGTTCAGCAATGAGGATGTTACTATTGGAGCTTGGATGCTTGCGATGAATGTCGAACATGAGGATAATCATGAACTTTGTGCTTCAGACTGTTCGGGCACTTCTATTGCTGTGTGGGATATACCAAAGTGTTCAGGCCTCTGTAATCCAGAAAATAAAATGTTGGCACTTCACAAAAAGGACACCTGCTCTAAGACACCAACCTTGGAATCTGATGATAATGATAATGATGATGATAATTAA 1023 0.4389 MPSSPKSSTYYARQAATSRRSTVIVAVIIITIIGIVALLRGGSRCLSPRPRSVRVVWEHGRSNENLGVGTNRHKVMGFVGIQTGFGSLGRRKALRKTWFPSDQEGLQRLEEATGLAFRFIIGKTRDRAKMSALQKEIAEYDDFLQLDIEEEYSKLPYKTLAFFKAAYALFDAEYYVKADDDIYLRPDRLSILLAKERSHTQSYIGCMKKGSVITDPELKWYEPLSYLLGKEYFLHAYGPIYVLSADVVSSLVALRNDSFRMFSNEDVTIGAWMLAMNVEHEDNHELCASDCSGTSIAVWDIPKCSGLCNPENKMLALHKKDTCSKTPTLESDDNDNDDDN 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0597 340 Pfam Galactosyltransferase 90 283 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lal1g0597 340 Gene3D - 71 295 - -
Lal1g0597 340 PANTHER HEXOSYLTRANSFERASE 7 325 - -
Lal1g0597 340 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 7 325 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0597 Lal-Chr1 3814474 3818836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0597 10 333 Glycosyltransferase AT1G53290 68.546 5.66e-174 484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0597 1 3814474 3818836 Lal1g0597 1 3814474 3818836 ECH
Lal1g1621 1 18631516 18637162 Lal1g0597 1 3814474 3818836 PCT
Lal1g0597 1 3814474 3818836 Lal1g1621 1 18631516 18637162 PCT