Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0204 ATGTCGAGGACCCGTGGCGAAGAAGAAATAATGAAGGGTTCTTTAAAGTGTGAAGATTGTGGGAACCAAGCAAAGAAGGATTGTGCATACTCAAGGTGCAGAACTTGCTGCAAGAACAAAGACTTTGAATGCCAAACCCATCTCAGGAGTACTTGGATTCCTGTTGATAGAAGGCGTCAGAGAGTATCATCTACTACTCCTACTCCTAATCCAAACCACCTTCATGGAGGATCAGATGACCCTAAAAGGTACAAGCATAACTCATATTCAGGTTTAGAGGAGTTCAAATTTCCAGCTTCAATGAGTTCCATGGCAGTATTCAACTGCGTTCGAGTGCAGTCTATGGATGATACAGTGAAGGAAATTGCATATCAAACATCTATTAACATCGGAGGACGTGTATTTAGTGGTCTTCTTTATGATCAAGGCCCTGATCAACAAAGTTTCAATGGTGCTAGAGGACAAAGATCTACAAACTCTCTTCATCAGCAACATAATAATCTCAATCTTGTTAGTTCTGAAATCCATGATGGTGCAACTATGGCTCAACCATCAGCAGCAGCAGCCACTGCTTATCATCAACCTTTTTTTCCTCCACCTCATGTGTTTCCCTTTTCAGATTCCTTCAAGCCTGGTTTGCCATGA 645 0.4186 MSRTRGEEEIMKGSLKCEDCGNQAKKDCAYSRCRTCCKNKDFECQTHLRSTWIPVDRRRQRVSSTTPTPNPNHLHGGSDDPKRYKHNSYSGLEEFKFPASMSSMAVFNCVRVQSMDDTVKEIAYQTSINIGGRVFSGLLYDQGPDQQSFNGARGQRSTNSLHQQHNNLNLVSSEIHDGATMAQPSAAAATAYHQPFFPPPHVFPFSDSFKPGLP 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0204 214 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 7 203 IPR007818 GO:0003700|GO:0006355
Lal1g0204 214 PANTHER BNAC01G23660D PROTEIN 7 203 - -
Lal1g0204 214 Pfam Domain of unknown function (DUF702) 14 145 - -
Lal1g0204 214 MobiDBLite consensus disorder prediction 55 85 - -
Lal1g0204 214 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 16 58 IPR006510 -
Lal1g0204 214 MobiDBLite consensus disorder prediction 57 73 - -
Lal1g0204 214 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 96 144 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0204 Lal-Chr1 1221889 1223522 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lal1g0204 DUF702 1.5e-46 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0204 1 1221889 1223522 Lal1g0204 1 1221889 1223522 ECH
Lal4g0084 4 507223 509833 Lal1g0204 1 1221889 1223522 ECH
Lal21g0130 21 904959 907545 Lal1g0204 1 1221889 1223522 ECH
Lal8g0554 8 3848411 3850205 Lal1g0204 1 1221889 1223522 ECH
Lal10g0869 10 16198212 16199850 Lal1g0204 1 1221889 1223522 ECH
Lal25g0538 25 3905058 3907407 Lal1g0204 1 1221889 1223522 ECH