Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0152 ATGGGTATGGTTAAATTGGTAGTGATGATGATGGTGGTGATAGCAGTTCTAAACCCAGCACAGGCTCAACCAGAGGCTAAGTTCAATTGCACAACAACAAATGCCACGTGTCGTGCTGTGATAGATTATACGAACCCAAATGGTACAACACTAAGTTACATCCAAACCCTCTTTAATGTTAAACAACTCATAGACATCCTCGGCGCAAACAACCTCCCTTCCAACACCACAGGCAACTACAGTGTGGGTCCGAACAAGGCAATAAAGGTCCCATTCCCATGCAAATGCAACAATGGGACGGGTCTATCGGACCAGGTTCCGGTGTACACCATAAAGACCGGAGATACTTTATATGACATAGCCACCACCGTTTTTGCAGGCTTGGTCAAGTATCCCAAGATCCAGGAGGTGAACAATATAAGTGATGGAAATACAATACATGTTGGGGATAAGTTATGGATCCCATTGCCATGTAGTTGTGATGAGGTTGGTGGAGTGAGTGTGGTTCATTATGGGCACCTTGTGGAGTTAGGAAATAGTATTGAAGGGATTGCTGAAGAATATGGAACTACACAACAAATACTTCTAACCCTTAATGGGATTACTGACCCTAAGACCCTTCAAGCTGGTCAACTTCTTCATGTTCCCCTTAAAGCTTGTTCTTCAAATGTAAGGAATGACTCATTGGATTACCCTTTGCTTGTTGCAAATGCTAGTTACATCTACACTGCTCATAACTGCATCAAATGCATGTGTGATTCTACCAACAACTTCAAATTAGAATGTGAGGAATCATCAGAATTGAAACCAACGAATTGGTCTATTTGTCCAACTACTCAATGTTCAAGCAATGTATACATTGGAAACATTACTGCTACAGATTCATGCAATCAAACAACATGTGACTATGCTGGTTATACCTCTAATAATATCTCTACAGTTCTTGCAACTCACAACACTTGTGCTGCAGCACCAAATGGTTCGGGTCCAAGTTCAGGAGCAACAAGAAGCACCTTACAAGGATGGTTTTGGAGTAATCTTTTCATTGTTATTCACTTAATCTTCTTTTCTATCTATCTTGTGTGTGTTACTAGACAGAAGAGACATGACATGGTTCTTGTCATAGCTGAGGATTATACTTCATTGGATGAGGTTAATGAGCATTGGCCTGGCCATGCTGTGATCATTCCACATGTGCTTGATGCTGAAAATGCTCATAAGTGTTGTTCTAAGAAAGCACCAATTCTTCAAAATGGTTGTGGCATCTGTTATGGTGGATTTGTATCTTCTGCCACAGGCGGATTATACTTCAAGAACAAAACATGGGTTAAGGAAACTAAAGGTATGCATCTTATAATTCATAACAACTACATGGTTGGTTTTGAGAAGAAGATAAAGCGATTTCGTGACTATGATCATGCAGAAGAGTCCCCTCTAGATTATGATATTTGGCGGATTAAACTAGTTTATCAGCATCAGCTCTGGTTCAAGCATTTAGATTTGGAACATGCTTTCTGA 1518 0.4045 MGMVKLVVMMMVVIAVLNPAQAQPEAKFNCTTTNATCRAVIDYTNPNGTTLSYIQTLFNVKQLIDILGANNLPSNTTGNYSVGPNKAIKVPFPCKCNNGTGLSDQVPVYTIKTGDTLYDIATTVFAGLVKYPKIQEVNNISDGNTIHVGDKLWIPLPCSCDEVGGVSVVHYGHLVELGNSIEGIAEEYGTTQQILLTLNGITDPKTLQAGQLLHVPLKACSSNVRNDSLDYPLLVANASYIYTAHNCIKCMCDSTNNFKLECEESSELKPTNWSICPTTQCSSNVYIGNITATDSCNQTTCDYAGYTSNNISTVLATHNTCAAAPNGSGPSSGATRSTLQGWFWSNLFIVIHLIFFSIYLVCVTRQKRHDMVLVIAEDYTSLDEVNEHWPGHAVIIPHVLDAENAHKCCSKKAPILQNGCGICYGGFVSSATGGLYFKNKTWVKETKGMHLIIHNNYMVGFEKKIKRFRDYDHAEESPLDYDIWRIKLVYQHQLWFKHLDLEHAF 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0152 505 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 9 322 - -
Lal19g0152 505 SUPERFAMILY LysM domain 108 156 IPR036779 -
Lal19g0152 505 ProSiteProfiles LysM domain profile. 171 215 IPR018392 -
Lal19g0152 505 CDD LysM 108 154 IPR018392 -
Lal19g0152 505 ProSiteProfiles LysM domain profile. 107 154 IPR018392 -
Lal19g0152 505 SUPERFAMILY LysM domain 172 216 IPR036779 -
Lal19g0152 505 SMART LysM_2 172 216 IPR018392 -
Lal19g0152 505 SMART LysM_2 108 155 IPR018392 -
Lal19g0152 505 Gene3D LysM domain 106 163 IPR036779 -
Lal19g0152 505 CDD LysM 173 215 IPR018392 -
Lal19g0152 505 Gene3D LysM domain 169 228 IPR036779 -
Lal19g0152 505 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 9 322 - -
Lal19g0152 505 Pfam LysM domain 175 216 IPR018392 -
Lal19g0152 505 Pfam LysM domain 109 155 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0152 Lal-Chr19 1271722 1281768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0152 10 351 LysM Receptor-like Protein (LYPs) Gene Family AT2G17120 47.093 3.48e-99 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0152 - - lang:109351135 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1033 14 12615206 12619502 Lal19g0152 19 1271722 1281768 LSH