Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1031 ATGGCTTCTTCAGAAGATGTGAAGAGTGGCGAATCAGCTGTTACAACAATCGTGAATCTCGCTGAGGAAGCTAAGCTCGCTAGAGAAGGCGTTGTTAACAAGGCTCCTTCCTATGCTCTCTCCACAATTTGCAAGTCTCTTCTTGCTGGTGGTATCGCTGGAGGAGTATCACGAACAGCAGTTGCTCCACTGGAACGGTTGAAAATTCTGCTCCAGGTCCAGAATCCTCATAACATAAAATACAATGGAACAATCCAAGGCCTGAAATATATATGGAGAACTGAAGGGTTGCGTGGACTGTTCAAAGGGAATGGTACTAACTGTGCTCGAATTGTCCCAAATTCTGCAGTGAAGTTCTTCAGTTATGAGCAAGCTTCTAAAGGCATATTGTATATGTATCAGCAGCAAACTGGAAATGAGGATGCTCAGTTGACTCCCGTTTTACGTCTTGGAGCTGGAGCATGTGCTGGAATAATTGCCATGTCTGCAACCTATCCAATGGATATGGTTCGAGGCAGGTTAACTGTACAGACTGAGAAATCCCCTTATCAGTACAGAGGAATGTTTCATGCTCTGTCTACCGTGCTTAGGGAAGAAGGACCTCGTGCTTTATATAAGGGCTGGCTTCCTTCAGTAATTGGAGTTATTCCATATGCGGGTCTCAACTTTGCTGTCTACGAGTCTTTAAAAGATTGGTTAATTAAATCCAAACCATTTGGTCTAGTTAATGATTCCTCTGAGTTGAGTGTGACAACTCGCCTAGCTTGTGGTGCTGCTGCTGGAACTCTTGGACAAACTGTTGCTTACCCTCTTGATGTCATTCGTCGAAGAATGCAGATGGTGGGTTGGAACCATGCTGCTTCTGTTCTAACTGGTGATGGAGGAGGTAAAGTTCCATTAGAATACACTGGAATGGTTGATGCATTTAGGAAAACTGTTCGGCATGAAGGATTTGGTGCATTGTACAAGGGTCTGGTGCCCAATTCTGTAAAGGTGGTTCCATCCATAGCACTTGCATTTGTTACATATGAGGTGGTGAAGGACATTTTAGGAGTTGAGATTAGAATATCAGACTAA 1077 0.4383 MASSEDVKSGESAVTTIVNLAEEAKLAREGVVNKAPSYALSTICKSLLAGGIAGGVSRTAVAPLERLKILLQVQNPHNIKYNGTIQGLKYIWRTEGLRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYMYQQQTGNEDAQLTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSPYQYRGMFHALSTVLREEGPRALYKGWLPSVIGVIPYAGLNFAVYESLKDWLIKSKPFGLVNDSSELSVTTRLACGAAAGTLGQTVAYPLDVIRRRMQMVGWNHAASVLTGDGGGKVPLEYTGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIALAFVTYEVVKDILGVEIRISD 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1031 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 144 232 IPR018108 -
Lal18g1031 358 PRINTS Mitochondrial carrier protein signature 46 59 IPR002067 GO:0055085
Lal18g1031 358 PRINTS Mitochondrial carrier protein signature 59 73 IPR002067 GO:0055085
Lal18g1031 358 PRINTS Mitochondrial carrier protein signature 103 123 IPR002067 GO:0055085
Lal18g1031 358 PRINTS Mitochondrial carrier protein signature 159 177 IPR002067 GO:0055085
Lal18g1031 358 PRINTS Mitochondrial carrier protein signature 205 223 IPR002067 GO:0055085
Lal18g1031 358 PRINTS Mitochondrial carrier protein signature 257 279 IPR002067 GO:0055085
Lal18g1031 358 Pfam Mitochondrial carrier protein 144 236 IPR018108 -
Lal18g1031 358 Pfam Mitochondrial carrier protein 43 128 IPR018108 -
Lal18g1031 358 Pfam Mitochondrial carrier protein 247 350 IPR018108 -
Lal18g1031 358 SUPERFAMILY Mitochondrial carrier 44 345 IPR023395 -
Lal18g1031 358 PANTHER BNAA09G39370D PROTEIN 3 353 - -
Lal18g1031 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 41 128 IPR018108 -
Lal18g1031 358 PANTHER SOLUTE CARRIER FAMILY 25 3 353 - -
Lal18g1031 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 248 349 IPR018108 -
Lal18g1031 358 Gene3D Mitochondrial carrier domain 39 352 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1031 Lal-Chr18 13285145 13289748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1031 45 353 EF-hand Containing Proteins AT5G61810 41.100 9.50e-67 212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1031 18 13285145 13289748 Lal18g1031 18 13285145 13289748 ECH