Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1014 ATGAGACTACCCTACTTCATAGCCAATCCAAATCACCATTCACTTCCAATTTTCGCGGCCACCACCACCGCGTGCATGGATGCTACCTTCCACCACCGTCACCGCCGGAAAGACAAGGTGGTGGTGATCATGGGCGCAACTGGTGCCGGAAAATCGCGCCTTTCCATCGACCTCGCTACCCACTTCTTCCCCTTCTCCGAAATCATCAACTCAGACAAAATTCAACTCTACAAAGGACTCAGCATCACTACCAACCAGATCCCCTTTGAAGAGCGCAACGGCGTCCACCACCATCTCCTAGGGGAGTTAGACCCCGCAAACGGCGAATTCACCCCATCGGAGTATCGCCGCCGTGCCGGAGAACTCATAACTGACATTACCTCCCGGAGGAAGCTCCCAATCCTCGTCGGAGGGTCCAACTCGCTCATTCACGCACTTCTCGTTGAAAGATTCAACCCCGAGTTAAGTGTGTTTGACCAACTTGATGAGTTGTCACCAACGATTCAAAACGAGTTGACTCGGTTGAGATACGAGTGTTGTTTTTTATGGGTGGATGTTTCATTCCAAGTGTTATCTGATTATTTGTTAAAACGAGTTGATGAAATGCTTGACTCGGGAATGGTGGATGAGTTGGCCGAGTTTTTTGACCCGGAATCGGACGATTTGGATTATGACTCGGCACATAGGAGTGGGTTGAGGAAAGCGATTGGTGTACCGGAGTTTGACTGTTATTTTAAGGAATACCCGCCGCCGTTTCGGAAACGAGGTTGTTGTCGGGTGGGAGAGGATCGTGTGCGGAAGGGTGCATATGAGTCTGCTGTGAGGGCGATTAAAGACAACACGTGTCACCTTGCTAAACGACAGATTGAGAAGATCATGCGGTTACAAAGGGCGGGGTGGGATTTACGTAGAATAGATGCCACGGCAGCGTTTAGGGCAATGCTAGACGGTGGAGGAAGGTGGTCGGAGATTTGGGAAAGGGAGGTATTGGAACCGAGCGTGAAGATTGTGAAGAGGTTGTTGTTGGAGTAG 1032 0.5039 MRLPYFIANPNHHSLPIFAATTTACMDATFHHRHRRKDKVVVIMGATGAGKSRLSIDLATHFFPFSEIINSDKIQLYKGLSITTNQIPFEERNGVHHHLLGELDPANGEFTPSEYRRRAGELITDITSRRKLPILVGGSNSLIHALLVERFNPELSVFDQLDELSPTIQNELTRLRYECCFLWVDVSFQVLSDYLLKRVDEMLDSGMVDELAEFFDPESDDLDYDSAHRSGLRKAIGVPEFDCYFKEYPPPFRKRGCCRVGEDRVRKGAYESAVRAIKDNTCHLAKRQIEKIMRLQRAGWDLRRIDATAAFRAMLDGGGRWSEIWEREVLEPSVKIVKRLLLE 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1014 343 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Lal18g1014 343 Pfam IPP transferase 168 289 - -
Lal18g1014 343 Pfam IPP transferase 75 151 - -
Lal18g1014 343 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 4-RELATED 30 342 - -
Lal18g1014 343 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 188 302 - -
Lal18g1014 343 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 30 342 IPR039657 -
Lal18g1014 343 Gene3D - 37 341 IPR027417 -
Lal18g1014 343 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 188 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1014 Lal-Chr18 13143193 13144224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1014 43 341 C2H2 Transcription Factor Family AT2G27760 28.385 2.43e-25 104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1014 18 13143193 13144224 Lal18g1014 18 13143193 13144224 ECH