Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1013 ATGGACCTATCTTCCACATTCAGATTCCGATCACAGAGCCTAACAACTCAGATACCCATTACTCTAATCAAGAACCCTTTCAAACATCACCAACTACACTTCTCAACTAAGTTTAACACCAAACCCAAAAGCACTACTTCACTTATTGTCTCAGCAAAGAAAAAAACACCCATTGAAGGTGTCAGTCATGAGTTGAACGCCATAGCTTCTTATAACCTTGACTTTGCTTACACTCGCAGAAGGGTCCGTGATGCTTTTTCTGAAGTGCAACTTCAACTTGATCATTGTTTGTTCAAGAATGCTCCTGATGGGATCAGAACTGAAGAATGGTATGAAAAGAATTCAAGGGGATTGGAAATTTTCTGTAAAAGCTGGATACCAGAACCTGGAGTTCCAATCAAGGCCTCTGTGTGTTTCTGTCATGGATATGGTGATACCTGCACCTTCTTCTTTGAAGGCATAGCAAGGAGAATTGCTGCATCTGGATATGGTGTTTATGCTATGGACTATCCAGGTTTCGGTCTTTCAGAAGGATTACATGGTTACATACCAAATTTTGATGATTTGGTTGATGATGTTATAGAGCATTATACAAGAGTTAAATTTAGGCCTGAGGTTAGAGGGTTGCCTCATTTCATATTGGGGCAGTCAATGGGTGGAGCAGTAACTCTTAAAGTTCATTTGAAGGAGCCAAATAACTGGGATGGAGTGATGCTTGTAGCACCAATGTGTAAAATTGCAGCTGAGGTATTACCACCAGATTCAATTATGAAGGGATTAGCTCTTTTGTCTAAAGTGATACCAAAAGCAAAGCTTTTCCCAAATCAAGATCTAGCGGAGTTGGCTTTCCGAGAACCAAGCAAAAGAAAATTGGCTGTTTACAATGTTATTTGTTATAATGATCAACCACGATTGAAAACTGGAATGGAACTTATAAGAGCCACAAAAGAAATTGAATCACAAGTGCAGGAGGTTTGTGCTCCATTATTGATTATGCATGGGGCAGAAGATAAGGTGACAGATCCATTAGTGAGTCAATTTCTTTATGAAAAAGCATCAAGCAATGATAAGACTCTAAAGATTTATGAAGGTGGTTACCATTGCATTTTGGAAGGAGAAACTGATGACAGAATTTTTGCTATACATGATGACATAATCTCATGGCTTGATGCTAGAGTAAAAAAAATAATACTTTCATGA 1200 0.385 MDLSSTFRFRSQSLTTQIPITLIKNPFKHHQLHFSTKFNTKPKSTTSLIVSAKKKTPIEGVSHELNAIASYNLDFAYTRRRVRDAFSEVQLQLDHCLFKNAPDGIRTEEWYEKNSRGLEIFCKSWIPEPGVPIKASVCFCHGYGDTCTFFFEGIARRIAASGYGVYAMDYPGFGLSEGLHGYIPNFDDLVDDVIEHYTRVKFRPEVRGLPHFILGQSMGGAVTLKVHLKEPNNWDGVMLVAPMCKIAAEVLPPDSIMKGLALLSKVIPKAKLFPNQDLAELAFREPSKRKLAVYNVICYNDQPRLKTGMELIRATKEIESQVQEVCAPLLIMHGAEDKVTDPLVSQFLYEKASSNDKTLKIYEGGYHCILEGETDDRIFAIHDDIISWLDARVKKIILS 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1013 399 Pfam Serine aminopeptidase, S33 133 374 IPR022742 -
Lal18g1013 399 PANTHER PHOSPHOLIPASE-RELATED 45 394 - -
Lal18g1013 399 PRINTS Alpha/beta hydrolase fold signature 162 177 IPR000073 -
Lal18g1013 399 PRINTS Alpha/beta hydrolase fold signature 213 226 IPR000073 -
Lal18g1013 399 PRINTS Alpha/beta hydrolase fold signature 329 343 IPR000073 -
Lal18g1013 399 SUPERFAMILY alpha/beta-Hydrolases 89 394 IPR029058 -
Lal18g1013 399 Gene3D alpha/beta hydrolase 103 396 IPR029058 -
Lal18g1013 399 PANTHER ALPHA/BETA-HYDROLASE SUPERFAMILY PROTEIN 45 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1013 Lal-Chr18 13124871 13129387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1013 50 393 Acyl Lipid Metabolism Gene Families AT1G77420 65.116 9.87e-175 491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1013 18 13124871 13129387 Lal18g1013 18 13124871 13129387 ECH
Lal22g0611 22 4282962 4286724 Lal18g1013 18 13124871 13129387 LSH