Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1009 ATGGTTTCTTCAAACCCTGTAGCTTCTCTATGTCTTTCTTCTCTTCTTCTAACCCTTTTTCTATGTGTAAATGGAGTTAGTTCTTCTTCCCACAATGGCACCAAAATTGGTGAAGGTTACCGTCTTGTCTCCATTGAAGAGACCCATGATGGTGGCCTTCTCGGATTCCTTCAAGTTAACCAAAAAACCTCAATCTATGGCTCTGATATCTCCCTCCTACGCTTCTATGCTAAGCATGAGACAGATGATCGATTAAGGGTACACATAACAGATGCAAATAAGAAAAGATGGGAAGTTCCTTACAATCTTTTACCAAGGGAGCAACCACCAGCATTGACTCAAACCATTGGAAGGTCAAGGAAGAATAAGGACCCTATAACAGTTTCTGAGTACTCTGGCTCTGAGCTTTTGTTCACTTACACTTCAGACCCTTTTAGCTTTAAAGTGAAAAGGAAGTCCAATGGTGAGACCCTTTTTGACACAAGCTCAGATGCTTCAGACCCTTTTAGTTCTTTGGTGTTCAAGGATCAGTACCTTGAGATTTCTACCAAATTGCCGAAAGATGCGCCTTTGTATGGTTTGGGAGAGAACACTCAGCCTCATGGGATTAAACTTTATCCAAGTGACCCTTACACTTTGTATACCACTGATATATCAGCTATTAATCTAAATGCTGATTTATATGGATCACACCCTGTGTATATGGATCTTAGAAATGCAGGTGGAAAAGCTTCTGCACATGCTGTTCTGTTGCTCAATAGCAATGGAATGGATGTTTTTTACAAAGGAACCTCTCTTACATACAAGATTATTGGAGGTGTATTTGATTTTTACTTCTTTTCCGGACCTTCACCTTTGAATGTTGTTGATCAGTATACTCAATTGATTGGTAGACCCGCTCCAATGCCTTACTGGGCTTTCGGATTCCACCAATGCAGATGGGGATATCACAATCTATCTGTGATAGAAGATGTTGTCGATAGTTACAAGAAGGCTCAAATCCCACTTGATGTGATCTGGAACGATGATGATCACATGGATGGGAAAAAGGATTTCACACTCAATCAAGTCAACTACCCTCGTCCAAAGCTTTTAAAATTCCTGGAGAAAATTCACAGCATTGGCATGAAATACATAGTCATTAATGACCCTGGAATTTCTGTTAACACCAGTTATGGCGTATATCAAAGGGGTTTAGCTAATGATGTTTTTATCAAGTATGACGGCGAACCATTCTTGGCTCAAGTTTGGCCGGGTGCTGTAAACTTTCCTGATTTTCTCAATCCAAAAACTGTTTCTTGGTGGGTTGATGAGATCCGCCGCTTCCATAAACTTGTTCCCATTGATGGCCTATGGATTGACATGAATGAAGTCTCAAGTTTCTGTTCTGGAAAGTGCAAAATTCCTCGAGGAAAGCAGTGCCCAACCGGGACGGGACCTGGATGGATATGTTGCTTGGATTGCAAAAACATTACCAAAACACGATGGGATGATCCTCCCTACAAAATAAATGCTTCTGGAATTCAAGCTCCTATTGGCTTCAAAACAATAGCCACAAGTGCAGTCCACTACAACGGCGTATTGGAGTACGATGCTCACAGTCTTTTTGGTTTCGCTGAATCCATTGCAACTCACAAGGGTCTTCTAGGAATTGAAGGCAAAAGGCCTTTTATTTTGTCCCGCTCCACTTTTGTGGGTTCTGGCAAATATACTGCACATTGGACCGGTGACAATCAGGGCACATGGGAGAACTTGAGGTACTCAATATCCACAATGCTCAATTTTGGCATATTTGGGGTACCAATGGTTGGTTCTGATATATGTGGTTTCTATCCACAACCCACCGAAGAGCTTTGCAATAGGTGGATTGAAGTAGGAGCTTTCTACCCTTTCTCAAGGGATCATGCAAACTACTATTCCCCTAGACAGGAGCTTTACCAATGGGAGTCAGTAGCCGAGTCGTCTCGAAATGCTCTGGGTATAAGATATAGGATCCTCCCATATCTTTACACCCTGAACTATGAGGCTCATGTTAGTGGAGCCCCAATTGCCAGGCCTCTTTTCTTCTCATTTCCTACTTACACCGAATGTTACGGCCTCAGCACCCAGTTCTTGCTTGGAAGCGGTCTCATGATTTCTCCAGTGCTTGAGCAGGGAAAAACAGAAGTGAAAGCACTTTTTCCTCCAGGTAGCTGGTACAGTTTGCTCGATTTGACAAGTACCATTACATCAAAGGATGGAATTTACATTACCCTCGACGCACCTCTGCATGTGGTCAACGTGCATTTGTATCAGAACACCATTCTTCCAATGCAGCAGGGTGGACTGATCTCTAAGGATGCTAGAATGACACCTTTCAGCCTCGTTATAACCTTCCCGGAAGGTGCAACTGATGGAGAAGCTAAAGGCAACCTTTTCCTTGACGAAGATGAGCTTCCGGAGATGACTCTTGGAAACGGCTATTCAACTTATGTTGATTTCCATGCAACTGTCAAACAAGGGGCTGTAAAAGTTTGGTCAGAAGTCCAAGAGGGAAAGTTTGCATTAGATAAAGGTTGGTATATTGAATCTGTATCTGTGTTGGGATTAGATGGAAGTGGAGCACTTTCTTCACTTGAGATAGATGGAAAGCCATTAGTTGGTGTCTCAGATTTGAAAGTTAGTGTATCAGAACATGTGCACTTGGATGGTAAGGAAAATGGAGAAAAGAAGACAGTGATGGTAGCCTTGAAGGGCTTGAACATCTCTATAGGAAAGAACTTTGCTGTGAACTGGAAAATGGGGTGA 2787 0.4245 MVSSNPVASLCLSSLLLTLFLCVNGVSSSSHNGTKIGEGYRLVSIEETHDGGLLGFLQVNQKTSIYGSDISLLRFYAKHETDDRLRVHITDANKKRWEVPYNLLPREQPPALTQTIGRSRKNKDPITVSEYSGSELLFTYTSDPFSFKVKRKSNGETLFDTSSDASDPFSSLVFKDQYLEISTKLPKDAPLYGLGENTQPHGIKLYPSDPYTLYTTDISAINLNADLYGSHPVYMDLRNAGGKASAHAVLLLNSNGMDVFYKGTSLTYKIIGGVFDFYFFSGPSPLNVVDQYTQLIGRPAPMPYWAFGFHQCRWGYHNLSVIEDVVDSYKKAQIPLDVIWNDDDHMDGKKDFTLNQVNYPRPKLLKFLEKIHSIGMKYIVINDPGISVNTSYGVYQRGLANDVFIKYDGEPFLAQVWPGAVNFPDFLNPKTVSWWVDEIRRFHKLVPIDGLWIDMNEVSSFCSGKCKIPRGKQCPTGTGPGWICCLDCKNITKTRWDDPPYKINASGIQAPIGFKTIATSAVHYNGVLEYDAHSLFGFAESIATHKGLLGIEGKRPFILSRSTFVGSGKYTAHWTGDNQGTWENLRYSISTMLNFGIFGVPMVGSDICGFYPQPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWESVAESSRNALGIRYRILPYLYTLNYEAHVSGAPIARPLFFSFPTYTECYGLSTQFLLGSGLMISPVLEQGKTEVKALFPPGSWYSLLDLTSTITSKDGIYITLDAPLHVVNVHLYQNTILPMQQGGLISKDARMTPFSLVITFPEGATDGEAKGNLFLDEDELPEMTLGNGYSTYVDFHATVKQGAVKVWSEVQEGKFALDKGWYIESVSVLGLDGSGALSSLEIDGKPLVGVSDLKVSVSEHVHLDGKENGEKKTVMVALKGLNISIGKNFAVNWKMG 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1009 928 CDD GH31_N 179 297 - -
Lal18g1009 928 Gene3D - 767 928 IPR013780 -
Lal18g1009 928 ProSitePatterns Glycosyl hydrolases family 31 active site. 450 457 IPR030458 -
Lal18g1009 928 SUPERFAMILY Galactose mutarotase-like 36 285 IPR011013 GO:0003824|GO:0005975|GO:0030246
Lal18g1009 928 Pfam Glycosyl hydrolases family 31 278 769 IPR000322 GO:0004553|GO:0005975
Lal18g1009 928 Pfam N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase 55 187 IPR031727 -
Lal18g1009 928 Gene3D - 665 764 IPR013780 -
Lal18g1009 928 PANTHER ALPHA-GLUCOSIDASE 3 928 - -
Lal18g1009 928 SUPERFAMILY Glycosyl hydrolase domain 682 762 - -
Lal18g1009 928 Gene3D Glycosidases 299 664 - -
Lal18g1009 928 PANTHER ALPHA-GLUCOSIDASE 3 928 - -
Lal18g1009 928 CDD GH31_MGAM_SI_GAA 297 677 - -
Lal18g1009 928 SUPERFAMILY (Trans)glycosidases 288 680 IPR017853 -
Lal18g1009 928 Gene3D glycosyl hydrolase (family 31) 33 298 - -
Lal18g1009 928 Pfam Galactose mutarotase-like 191 257 IPR025887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1009 Lal-Chr18 13095397 13100304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1009 28 928 Glycoside Hydrolase AT1G68560 75.831 0.0 1463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1009 18 13095397 13100304 Lal18g1009 18 13095397 13100304 ECH