Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1007 ATGGAGAGATTGGAGGGTTCTTCGGCGGCAACAACAACATCGTACCAGGGGTATGTGAGGTGGGAGGAGGTGTTTGTTTCGAGTGAAAAGGGAAGAAGGGTGGTTCATTATTTTCTCAAGAGACGAAGTGGTGATTCGGATCTTGCAGTGATAGGAAAAGAGAAGAGCTTGAGGCACATGCATTATCGTTATGCGATGAGGAACCCTTCTTTGGGTCCTTATTTGAAGCTCAAATCAAGAAGAGAGGTTATTGAATGGTTGGATTCCATTGTTTCAGATTCGTCTGCAGAAGATGTATCTCATGTGGAAGATGCTATTAAGGCAGACGAGCATGGTTGTGGGCCTGAAATTCAAACCTTGAAGGATAATCAATCGCGGGAGTTGAGCATCTTTACAAAAGAATTCACCTGGTTAGGGTCACCTTGGACCTGTATGAAAAGAAGAAACCACTATCAGTCATTTAAGCGAAATGGTTTTCAGATATCTGTATATGATTTTGTTTACATTCTAGCAGAAGAGGACAAACATCTAGTTGCCTACTTGGAAGACCTGTATGAAGACTCCAGAGGCAACAAGATGGTTATGGTACGCTGGTTTCACAAAATTGATGAGGTTAGTATTGTTTTGCCTCACAGTTTTAGTGACAGAGAGGTTTTCTTTTCTCATTATCTTCAAGATCTCAGTGTTGAATGCATAGATGGATTGGCTAGTGTCCTCAGCCCCCAGCATTACAAGAAGTTTCAGAACAAGGCCCATTATCCACACTTGGAACCGTTTGTGTGTGAGCATCAATTTGATGATAATGGTGTCAAACCTTTTGATATAACTCAAATTAGGGGTTATTGGAAGCAGGAAATAGTAAGGTACATCTATACTCTCTCTGACTCGAAGTCTAATGGTTGCTCTGGGCAATCAAAGTCTAATGGTAGCTCTGGGCAATCGAAGTCTAATGGTAGCTCTGGGCAATCGAAGTCTAATGGTAGCTCTGGGCAATCGAAGTCTAATGGTAGCTCTGGGCAATCGAAGTCTAATGGTAGCTCTGGGCAATCGAAGTCTAATGGTAGCTCTGGGCAATCGAATTCTAATGGCAGCTCTGGGCAATCGAAGTCTAATGGCAGCTCTGGGCAATCGAAGTCTAATGGCAGCTCTGGGCAATCGAAGTCTAATGGCAGCTCTGGGAAACCGAAGTCTAATGGCAGCTCTGGGAAATCAAAGTCTAACGGGAGATCTGGGAAATCAAAGTCTAACGGGAGTTCTGGGCAATCAAAGTCTAATGGGAGTTCTGGGCAATCTGATGATAGGTCAGAACTGGAAGAGAACCTCCACTGTGCTACAGGGATTAGACCTAAGAAGAGACAGTGCTGTACAAAAGTTGGCTTGAAAGAAGTGGTTGATGTAGCTGCTCTTAAATCGGAAAATCTGAGTTGCAGCCAGATTAATAAGAAAATCAGCGCTGGAAACAATTCGTCTAAAATCACTGGTCCCACCACATTGGCTAACGTCAAAGAAACAAATGTTACATTACAGTATTTTGTTGTAGGTTCCGAAGTTGAGATCCTCTCTCAAGACAGTGGGATTAGAGGGTGTTGGTTTAGAGCCTCCGTTATTAAGAAGCATAAAGATAAAGTGAAGGTGCAATATCAAGACATTCAGGATGCAGTTGATGAAGCTAAGAAGCTTGAGGAATGGGTTTCATCATCTAGAGTTGCATTGCCCGATGATATGGGTCTTCGAATGCATGAGAGGGTCAAGATCCGGCCAGCAAGGGAGTCTAAAAAATGCGAAATTCCTTGGTTGGGTGGTGTTGGTTCCATTGTTGATGCATGGTGGCATGATGGATGGTGGGAAGGCATTGTTGTTCTGGAAGAGGCTGATGCTAAATATCACGTCTATTTCCCAGGGGAGAAAGTGGTATCAACTTTTGGTCCTGATAAATTAAGACCTTCTGAAGATTGGTCAGGGAATGGGTGGGTGAATATGAGGGAAAGGCCTGATCTTGTGACTTCTATATTATCTAGCTTAAAAACAAAGCAAGAGTCCTCCAAATCCTATGATAGCAAATCTACTGTAGCATCTGCAGATAGAGTACAATCTAAGCAATCTGATACTTGCTTGGATAAACCTCGAAAATTTGAGGTGGTTCCAGATCTCTTGAAGAATGATTTATTTCCTCAACTAAGATGGATGACCAAGAAAAGGAGACAATATAGCAATACATCTTGTCAGAACCTACCAAAGGTTGTTGAGTCAGATTCTTCTGACTGTTTTGTGATTCCAGCATCAATAAAAGTTGATCATGAGGGTTACAATTATGGAGGGGATCCTTCCATTTATAGTTCTTCAGCTGTTCCTTCTTTAACTAATTTGGTCATGTGTAGGTGA 2382 0.4236 MERLEGSSAATTTSYQGYVRWEEVFVSSEKGRRVVHYFLKRRSGDSDLAVIGKEKSLRHMHYRYAMRNPSLGPYLKLKSRREVIEWLDSIVSDSSAEDVSHVEDAIKADEHGCGPEIQTLKDNQSRELSIFTKEFTWLGSPWTCMKRRNHYQSFKRNGFQISVYDFVYILAEEDKHLVAYLEDLYEDSRGNKMVMVRWFHKIDEVSIVLPHSFSDREVFFSHYLQDLSVECIDGLASVLSPQHYKKFQNKAHYPHLEPFVCEHQFDDNGVKPFDITQIRGYWKQEIVRYIYTLSDSKSNGCSGQSKSNGSSGQSKSNGSSGQSKSNGSSGQSKSNGSSGQSKSNGSSGQSKSNGSSGQSNSNGSSGQSKSNGSSGQSKSNGSSGQSKSNGSSGKPKSNGSSGKSKSNGRSGKSKSNGSSGQSKSNGSSGQSDDRSELEENLHCATGIRPKKRQCCTKVGLKEVVDVAALKSENLSCSQINKKISAGNNSSKITGPTTLANVKETNVTLQYFVVGSEVEILSQDSGIRGCWFRASVIKKHKDKVKVQYQDIQDAVDEAKKLEEWVSSSRVALPDDMGLRMHERVKIRPARESKKCEIPWLGGVGSIVDAWWHDGWWEGIVVLEEADAKYHVYFPGEKVVSTFGPDKLRPSEDWSGNGWVNMRERPDLVTSILSSLKTKQESSKSYDSKSTVASADRVQSKQSDTCLDKPRKFEVVPDLLKNDLFPQLRWMTKKRRQYSNTSCQNLPKVVESDSSDCFVIPASIKVDHEGYNYGGDPSIYSSSAVPSLTNLVMCR 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1007 793 MobiDBLite consensus disorder prediction 297 431 - -
Lal18g1007 793 Coils Coil 540 560 - -
Lal18g1007 793 SMART agenet_At_2 602 654 IPR014002 -
Lal18g1007 793 SMART agenet_At_2 509 575 IPR014002 -
Lal18g1007 793 MobiDBLite consensus disorder prediction 683 699 - -
Lal18g1007 793 PANTHER AGENET AND BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 9 370 - -
Lal18g1007 793 PANTHER AGENET AND BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 421 792 - -
Lal18g1007 793 SMART BAH_4 159 276 IPR001025 GO:0003682
Lal18g1007 793 MobiDBLite consensus disorder prediction 683 703 - -
Lal18g1007 793 ProSiteProfiles BAH domain profile. 159 276 IPR001025 GO:0003682
Lal18g1007 793 MobiDBLite consensus disorder prediction 297 437 - -
Lal18g1007 793 Pfam Agenet domain 514 587 IPR008395 -
Lal18g1007 793 Gene3D - 141 447 IPR043151 -
Lal18g1007 793 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 421 792 - -
Lal18g1007 793 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 9 370 - -
Lal18g1007 793 Pfam BAH domain 161 268 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1007 Lal-Chr18 13059480 13063774 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1007 18 13059480 13063774 Lal18g1007 18 13059480 13063774 ECH