Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1005 ATGAGAAATATGCAAAGCTTCAAAACAGCTCTAACAAATTCTCAAGTTTATTGCCATTCTTCCTTCTTGCTTAGGGGAGATGAAACTAACAGAAACCCACCACGTTTCTCTGATCTTGGAGACATTCAACATTCTGCTTCTGTGTTCCAACATGAAGATGCTGTTGATTTAAGTTCAAGCTCTATGTTTAGTGTAAAATCTAGCAATGTAGCTATTGGTGGCAGTAACATGCAATATGGAACATTGCAGACGAACTTTGGGCCTACTGAGATTGGGTCAAATGAGGGAGGGTGCATGGACATGTACCAGAAGGGAATTGCTATGGCTACTTTGCCTATGGGGAATGGCCATGTTGAGAATTGGGGTGATTCTGGCATAGCAGATAATAGCCAACACACTGATGATACTTCCACTGATATTGACACTGATGATAAAAACCAATGTAATAGAGCTCAGCACGGGTCACTTATAGTAGTGGACTCCAATGATCAGACAAAGGCCAAACCTGAAGATCACAAGACACTTCGTAGGTTGGCTCAGAATCGGGAGGCTGCAAGGAAGAGTCGATTAAGGAAAAAGGCATATGTACAGCAGTTGGAGACTAGCCGAGTCAAGCTTGCACAATTAGAGCAGGAGCTTCAGCGAGCACGTCAACAGGGTATATTTATTGCAAATCCTGGTGATCATTGTCATTCGGCTGTTGGAAATGGCGCCTTAGCATTTGACTTGGAGTATGCCCGTTGGGTTGATGAGCATCAACGGTTTCTCAATGACCTAAGATCTGCTATAAATTCTCAAATCTGTGACAGTGATTTACATCTTCTTGTTGATGGTGTCATGGCACATTATGATGAATTATTTAGGTTAAAGAGTGTAGGAGTGAAAGCTGATGTATTCCACATTCTCAGTGGGATGTGGAAGACACCTGCAGAAAGATGGTTTATGTGGCTTGGTGGATTTCGTTCCTCTGAACTTCTTAAGATAGTTAAGAACCACCTTGAGCCGTTAACAGAACAGCAATTAGCGGGCATTGATAATCTGCAGCACTCTTCGCAACAGACCGAGGATGCTTTATCTCAAGGCATGGAAGCATTGCAACAATCTCTAATAGAGACACTTACCTGCACCTCACTAGGATCCACTGGTTCAGGAAATGTTGCGGATTACATGGGTCAAATGGCGATTGCAATGGGCAAGCTTGCCGCACTGGAGAATTTCCTTCGTCAGGCTGACCTCTTGAAGCAAGGAACTCTGCAACAGCTGCAACGAATCCTGACTACACGTCAAGCTGCTCGTGCTCTCATCGTTATAAATGATTATGTTTCAAGACTAAGAGCGCTTAGTTCATTATGGTTAGCGCGCCCTAGAGAGTAG 1374 0.436 MRNMQSFKTALTNSQVYCHSSFLLRGDETNRNPPRFSDLGDIQHSASVFQHEDAVDLSSSSMFSVKSSNVAIGGSNMQYGTLQTNFGPTEIGSNEGGCMDMYQKGIAMATLPMGNGHVENWGDSGIADNSQHTDDTSTDIDTDDKNQCNRAQHGSLIVVDSNDQTKAKPEDHKTLRRLAQNREAARKSRLRKKAYVQQLETSRVKLAQLEQELQRARQQGIFIANPGDHCHSAVGNGALAFDLEYARWVDEHQRFLNDLRSAINSQICDSDLHLLVDGVMAHYDELFRLKSVGVKADVFHILSGMWKTPAERWFMWLGGFRSSELLKIVKNHLEPLTEQQLAGIDNLQHSSQQTEDALSQGMEALQQSLIETLTCTSLGSTGSGNVADYMGQMAIAMGKLAALENFLRQADLLKQGTLQQLQRILTTRQAARALIVINDYVSRLRALSSLWLARPRE 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1005 457 PANTHER TRANSCRIPTION FACTOR TGA9 41 457 - -
Lal18g1005 457 Pfam bZIP transcription factor 172 210 IPR004827 GO:0003700|GO:0006355
Lal18g1005 457 SMART brlzneu 169 232 IPR004827 GO:0003700|GO:0006355
Lal18g1005 457 CDD bZIP_HBP1b-like 173 224 - -
Lal18g1005 457 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 176 191 IPR004827 GO:0003700|GO:0006355
Lal18g1005 457 SUPERFAMILY Leucine zipper domain 173 215 IPR046347 GO:0003700|GO:0006355
Lal18g1005 457 MobiDBLite consensus disorder prediction 122 145 - -
Lal18g1005 457 ProSiteProfiles DOG1 domain profile. 238 454 IPR025422 GO:0006351|GO:0043565
Lal18g1005 457 Gene3D - 172 221 - -
Lal18g1005 457 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 171 215 IPR004827 GO:0003700|GO:0006355
Lal18g1005 457 Pfam Seed dormancy control 256 330 IPR025422 GO:0006351|GO:0043565
Lal18g1005 457 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 41 457 - -
Lal18g1005 457 Coils Coil 192 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1005 Lal-Chr18 13047246 13052019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1005 6 457 bZIP Transcription Factor Family AT1G68640 57.660 4.01e-168 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal18g1005 DOG1 5.2e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1005 18 13047246 13052019 Lal18g1005 18 13047246 13052019 ECH