Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1002 ATGGACCCTTTCACTCATCTTTTCTTCTATCTCCTTCTCTTATCCTCTTCCACATTAACACACTCTCGCACAACACCTTATAACCCCAAAACGACACTCCTCGATGTCGCTTCATCCATTAAAAAAACCCAAAACATCTTTACCTTAAACTTAAACCACAACCTTCGTTCTTCTTTCAATTCAAACCCACTATTAACTACACTCTCACTCCAACTACATTCTCGAGCTTCCATTCAAAACCCCTCACACATAAACTACAACTCGTTAATCCTCTCTCGACTCGCCCGCGACTCAGCCCGAGTCAAATCACTACTAACTCGGTTAGATATCTCCCTAAAGCGCGTTTCCCAAACCGATACACAAAAACAAGACTCATTTACCTTTAACGAAATCCAAGGTCCCATTGTTTCAGGAACGAGTCAAGGAAGCGGTGAGTACTTCCTCCGAGTCGGAATCGGTAACCCGCCGATTTCATCCTTCATGGTTCTCGACACCGGAAGTGACGTCAGCTGGATCCAATGCGAACCTTGCTCTGAATGTTACCAGCAAACCGATCCAATCTTCGAACCGAGTTCGTCTTCTTCTTACGCGCCGATTACCTGCGACGCGCCTCAGTGCAAGTCACTGGATCTCTCTGAATGCCGTAACGGAACTTGTCTTTATGAAGTTTCTTACGGTGACGGTTCCTACACAGTAGGTGAATTCGCGACGGAAACTGTTACTCTAGGTTCCGCTTCTGTTGAAAACGTTGCTATTGGATGTGGACACACTAATGAAGGTTTATTCGTCGGTGCTGCCGGTTTGCTTGGTTTAGGTGGAGGTTCGGTTTCTTTCCCGGCTCAACTCAATGCGACGTCGTTTTCTTACTGCCTTGTTGATCGTGACTCTGATTCCGCTTCCACGCTCGAGTTCAACTCGCCGTTGCCTCGTGGCGCCGTTACTGCGCCTTTACGGCGGAGCAAGGAAATGGAGACGTTTTATTACATAGGATTGTCGGGAATCAGTGTTGGCGGTGAGATGCTTCCGATTCCGGATTCAAGTTTTCAGGTGGATGATTCCGGCGTCGGAGGTATTATTGTGGATTCCGGCACGGCGGTTACGCGGTTGCGGGATGAGGTTTATGATTCTCTACGTGACGCGTTTGTGAGAGGGACTAGTGAGTTGACGAAGGTGAATGGTGTTGCGTTGTTTGATACATGCTACGACTTGTCGTCGAAGTCGAGCGTGGAAGTTCCGACGGTGTCGTTTCACTTTCCAGAGGGGAAGGTGTTACAGTTACCGGCGAAGAATTACCTGATACCGGTTGATTCGGTGGGGACTTTTTGTTTTGCGTTCGCGCCAACGATGTCTACGTTGTCGATTATTGGGAACGTTCAGCAGCAGGGGACACGTGTCAGTTTCGATCTTGCTAACGACGTCGTTGGATTCTCTGCCAATAGCTGCTAG 1446 0.482 MDPFTHLFFYLLLLSSSTLTHSRTTPYNPKTTLLDVASSIKKTQNIFTLNLNHNLRSSFNSNPLLTTLSLQLHSRASIQNPSHINYNSLILSRLARDSARVKSLLTRLDISLKRVSQTDTQKQDSFTFNEIQGPIVSGTSQGSGEYFLRVGIGNPPISSFMVLDTGSDVSWIQCEPCSECYQQTDPIFEPSSSSSYAPITCDAPQCKSLDLSECRNGTCLYEVSYGDGSYTVGEFATETVTLGSASVENVAIGCGHTNEGLFVGAAGLLGLGGGSVSFPAQLNATSFSYCLVDRDSDSASTLEFNSPLPRGAVTAPLRRSKEMETFYYIGLSGISVGGEMLPIPDSSFQVDDSGVGGIIVDSGTAVTRLRDEVYDSLRDAFVRGTSELTKVNGVALFDTCYDLSSKSSVEVPTVSFHFPEGKVLQLPAKNYLIPVDSVGTFCFAFAPTMSTLSIIGNVQQQGTRVSFDLANDVVGFSANSC 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1002 481 Pfam Xylanase inhibitor C-terminal 327 477 IPR032799 -
Lal18g1002 481 Gene3D Acid Proteases 118 304 IPR021109 -
Lal18g1002 481 ProSiteProfiles Peptidase family A1 domain profile. 146 477 IPR033121 -
Lal18g1002 481 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 22 481 - -
Lal18g1002 481 SUPERFAMILY Acid proteases 139 481 IPR021109 -
Lal18g1002 481 Gene3D Acid Proteases 306 481 IPR021109 -
Lal18g1002 481 PANTHER ASPARTYL PROTEASES 22 481 IPR001461 GO:0004190|GO:0006508
Lal18g1002 481 Pfam Xylanase inhibitor N-terminal 146 304 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1002 Lal-Chr18 13018895 13020340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1002 136 481 Miscellaneous Gene Families AT1G77480 26.804 1.02e-23 101
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1002 18 13018895 13020340 Lal18g1002 18 13018895 13020340 ECH