Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0992 ATGGCCACTGTTGCAACTACAGGAATTGGAGTAGGAGTCCCAAAGCACCAACCCCACAAACCCAAACACAAGTCCTTGTTTCTTGGCCAGAGACTAAGAACAAGACTCTTTACTGAGGCACCATGCAGTGCAAGTTTAACTTTCTCAAGAAAATCAAAATCTTTTCAAGTTTTTGCATTAGGAGCTGAATGGGTTGATTCAATTCACAACCTTTTTGTGGGTGTTGGTGTTGGTCTTCCATGCACTGTGATGGAGTGTGGTGATATAATATATAGAAGCACTCTTCCTAAGTCCAATGGTTTAACACTTACAGTCCCTGGTGTGGTTCTGGCTTTGGGTGCTCTTTCTTATCTCTGGGCTACACCTGGTGTTGCTCCTGGTTTCTTTGACATGTTTGTTCTTGCTTTTGTTGAAAGGTTGTTCCGACCCACTTACAAAAAAGATGATTTTGTTCTAGGGAAGAAGCTGGGGGAGGGTGCCTTTGGAGTCGTGTATAGAGGGACACTTGCCAACAAGCCCTCTTCAAAGGAAGGTGATTTAGTCTTGAAGAAGGCGAGTGAATATGGCGCTGTTGAAATTTGGATGAATGAGCGTGTGCGAAGAGCTTGTGCAAACAGTTGTGCAGATTTTGTTTATGGTTTTCTTGAGACCTCTTCAAAGAAAGGTGCTGAATACTGGATTGTCTGGCGGTTTGAAGGGGATGCCACCCTAGCTGACCTTGTGCAGAGTAGAGAATTTCCATATAATGTTGAAACACTGATTCTGGGTAAGATCCAGGACTTGCCGAAGGGATTGGAAAGAGAAAATAGAATCATTCAAACAATCATGAGGCAACTCTTGTTTGCATTGGATAGTCTTCATTCAACTGGTATTGTGCACAGGGATATTAAGCCACAGAACATTATTTTCTCTGAAGGGTCTCGTACATTCAAAATCATTGATCTTGGAGCTGCTGCCGACCTGCGAGTTGGCATCAACTACATTCCTAAGGAATTTCTTTTGGATCCAAGATACGCTGCACCAGAGCAGTACATCATGAGCACACAAACTCCGTCTGCACCCTCGGCTCCAGTTGCAACTGCACTTTCCCCAGTTTTATGGCAGTTGAATTTGCCCGACAGATTCGACATCTATAGTGCTGGTCTAATCTTTCTTCAAATGGCATTCCCCAGTTTACGCACTGATAACGGCCTCATACAATTTAACCGTCAGTTAAAGAGGTGTGACTATGACTTAGTTGCTTGGAGAAAAAGCGTAGAGCCTCGATGTGGAGCTGAACTTAGGAGGGGCTTCGAGCTGTTAGATTTAGACGGTGGAATAGGATGGGAACTTCTGACATCAATGGTCCGTTACAAAGCAAGGCAACGGTTAAGTGCAAAAGCAGCATTAGCTCATCCTTTCTTTGTCAGAGAAGGCTTGTTGGCATTGTCTTTCATGCAAAACCTGAGGCTTCAGCTCTTACGTGCAACTCAGAAGGATTATGGGGAAGCTGCAAAGTGGATTATTCAGCTAATGGCAAAATCGGGAACAGAGAAGGATGGTGGATTTACCGAAGCTCAGCTCCAGGAACTGAGAGAAATTGAACCCAAGAAGAAGAAGAAAGGTAATTCACAGAAAAATCCTCTAGCATCAGCACTTAAACTTCAGAGGAAAATTATAAAAACCTTAAATGAGAGTATGGATGAGCTCAACAGACGCAGGAAAAGCCTTTGGTGGAGCAGATGGATCCCAAGAGAGGAATGA 1743 0.4378 MATVATTGIGVGVPKHQPHKPKHKSLFLGQRLRTRLFTEAPCSASLTFSRKSKSFQVFALGAEWVDSIHNLFVGVGVGLPCTVMECGDIIYRSTLPKSNGLTLTVPGVVLALGALSYLWATPGVAPGFFDMFVLAFVERLFRPTYKKDDFVLGKKLGEGAFGVVYRGTLANKPSSKEGDLVLKKASEYGAVEIWMNERVRRACANSCADFVYGFLETSSKKGAEYWIVWRFEGDATLADLVQSREFPYNVETLILGKIQDLPKGLERENRIIQTIMRQLLFALDSLHSTGIVHRDIKPQNIIFSEGSRTFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPSLRTDNGLIQFNRQLKRCDYDLVAWRKSVEPRCGAELRRGFELLDLDGGIGWELLTSMVRYKARQRLSAKAALAHPFFVREGLLALSFMQNLRLQLLRATQKDYGEAAKWIIQLMAKSGTEKDGGFTEAQLQELREIEPKKKKKGNSQKNPLASALKLQRKIIKTLNESMDELNRRRKSLWWSRWIPREE 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0992 580 Gene3D Transferase(Phosphotransferase) domain 1 259 472 - -
Lal18g0992 580 Coils Coil 546 566 - -
Lal18g0992 580 ProSiteProfiles Protein kinase domain profile. 150 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0992 580 ProSitePatterns Protein kinases ATP-binding region signature. 156 183 IPR017441 GO:0005524
Lal18g0992 580 Pfam Protein kinase domain 152 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0992 580 SMART serkin_6 150 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0992 580 Gene3D Phosphorylase Kinase; domain 1 136 230 - -
Lal18g0992 580 SUPERFAMILY Protein kinase-like (PK-like) 145 471 IPR011009 -
Lal18g0992 580 PANTHER SERINE/THREONINE-PROTEIN KINASE STN7, CHLOROPLASTIC 16 580 - -
Lal18g0992 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 291 303 IPR008271 GO:0004672|GO:0006468
Lal18g0992 580 CDD STKc_SNT7_plant 154 468 - -
Lal18g0992 580 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 16 580 IPR044803 GO:0004674|GO:0009579
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0992 Lal-Chr18 12905882 12912183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0992 268 468 Core Cell Cycle Gene Families AT2G38620 30.189 1.39e-14 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Lal18g0992 Pkinase 4.8e-19 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0992 18 12905882 12912183 Lal18g0992 18 12905882 12912183 ECH