Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0943 ATGGCTTTTATGTCTGAAGTCAACATGAGCAGCTTCTCTCACTATATGGATGATGAATATGAGAAACTCTTCCGCAGAGTTAACCCTCCCAGAGTTGTAATTGATAATGAAGCCTGCAAGAATGCCACTGTTATAAGGGTTGATAGTGCAAATAAGCATGGAATACTTCTTGAAGTTGTACAAATCCTCACTGATCTAAACCTCATCATAACAAAGGCTTACATTTCTTCTGATGGTGGATGGTTCATGGATGTTTTTAATGTTACTGGCCAAGATGGAAACAAAGTTACAGATGAGGCTATTCTGGATTTCATTACAAAGTCTCTTGGTCCTGAATCTTGTGTTACATCTCCTATGAGATCTGTTGGGGTGAAACAAACAATGGACCACACTGCAATAGAGCTCTTAGGGAGTGATAGGCCAGGATTGCTCTCAGAAGTGAGTGCTGTTCTAACAAACCTCAACTGCAACATATTGAATGCCGAGGTGTGGACTCACAATGCACGCGCCGCTGCTGTTATACATGTAAATGATGAAGAGACAGGTTCTGCTATCGGTGACCCTCAGAAGCTATCTTTAATCAAGAAGCTTCTATGCAATGTGCTTCGTGGCGGGAACAAGAAGAGGGGTGCAAAAACTGTTGTCACTGATGAAATCACACATACTGAGAGAAGGCTTCATCAGATGTTGTTTTCTGATAGGGATTATGACAGAGTTAATGATGATGACTTTGATGAGAAGCAAAGACCAAATGTAAATGTTGTGAATTGGTCTAAAAAGGATTACTCTGTGGTTACCATACAATCTAAGGATAGGCCTAAGCTTCTCTTTGACACAGTTTGTACTTTGACAGACATGCAGTATGTTGTTTTTCATGCAAATATAGATGCTGAGGGACCAGAAGCATACCAGGAATATTACATCAGACATATAGATGGTTCCCCTGTAAAGTCAGATGCAGAAAGACAAAGAGTGATACTATGTCTTGAAGCTGCTATTGAAAGAAGAGTTTCTGAGGGTTTGATGCTAGAACTTTGCACCACAGACAGGGTTGGATTACTATCCGATGTCACACGAATCTTCAGAGAGAACAGTCTCACAGTCACAAGGGCAGAAGTAACCACTAAAGGCGGCAAAGCTGTTAACACTTTCTATGTTCGAGGCGCTTCTGCTTGCACTGTTGATTCTAAGACCATAGAATCGATTCGCCAAGCAATCGGCAACACTATCCTTCAAGTAAAAGGTTGTCCTGATGAGTCAAAATCTGTTTCTCAAAATTCTCAGACCAGATCCCTCTTTAGTGGTCTTTTCAAATCAAGATCCTTTGTTAACTTTGGGTTGGTTAAGTCTTATTCTTGA 1359 0.4077 MAFMSEVNMSSFSHYMDDEYEKLFRRVNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVTGQDGNKVTDEAILDFITKSLGPESCVTSPMRSVGVKQTMDHTAIELLGSDRPGLLSEVSAVLTNLNCNILNAEVWTHNARAAAVIHVNDEETGSAIGDPQKLSLIKKLLCNVLRGGNKKRGAKTVVTDEITHTERRLHQMLFSDRDYDRVNDDDFDEKQRPNVNVVNWSKKDYSVVTIQSKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPEAYQEYYIRHIDGSPVKSDAERQRVILCLEAAIERRVSEGLMLELCTTDRVGLLSDVTRIFRENSLTVTRAEVTTKGGKAVNTFYVRGASACTVDSKTIESIRQAIGNTILQVKGCPDESKSVSQNSQTRSLFSGLFKSRSFVNFGLVKSYS 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0943 452 CDD ACT_ACR_3 262 336 - -
Lal18g0943 452 CDD ACT_ACR_2 131 204 - -
Lal18g0943 452 ProSiteProfiles ACT domain profile. 342 421 IPR002912 -
Lal18g0943 452 ProSiteProfiles ACT domain profile. 44 123 IPR002912 -
Lal18g0943 452 SUPERFAMILY ACT-like 39 107 IPR045865 -
Lal18g0943 452 Gene3D - 341 416 - -
Lal18g0943 452 Gene3D - 127 199 - -
Lal18g0943 452 ProSiteProfiles ACT domain profile. 132 219 IPR002912 -
Lal18g0943 452 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-LIKE ISOFORM X1 13 450 - -
Lal18g0943 452 CDD ACT_ACR_1 42 112 - -
Lal18g0943 452 Pfam ACT domain 132 181 IPR002912 -
Lal18g0943 452 Pfam ACT domain 43 101 IPR002912 -
Lal18g0943 452 SUPERFAMILY ACT-like 127 184 IPR045865 -
Lal18g0943 452 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 13 450 IPR040217 -
Lal18g0943 452 SUPERFAMILY ACT-like 338 408 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0943 Lal-Chr18 12279511 12282661 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0943 18 12279511 12282661 Lal18g0943 18 12279511 12282661 ECH
Lal22g0673 22 4765393 4769464 Lal18g0943 18 12279511 12282661 LSH
Lal6g0765 6 5126446 5130170 Lal18g0943 18 12279511 12282661 LSH