Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0928 ATGGATTGGACCTCCTCTTCAAAAACCCGACCCAAATCGGATATATACTCCACCTTCGTCGTCCACGACGATGACGACGGCGATTATGGCGGCGGCGAAACTAACTGGCGCCGGAAACCGGGAAGTTCTGAGCCACAGGACGATCCGTTCTCAACAATGGTGTTCAAAGACAACGGTCACGATGACGACGAAGACTCCTCTCTTCCTCCACTCTTCAAGCGCCTTCCCAAGGACTTCGGCGGAGCTTCTCTTGACTACGACGACGATGAAGATTCCGGCGATTTCGGCACCATGATTGTGAAAACCGATCGTCGGAATCGACCTTCTCCTGCCGGATCCACATGGAAAGATCAAAGTTCTTCTATGGAGAGTGCTCTGAACAGGTTCCGCAACAGCGATGATAATTACGGCGACGGCGGTGATGATGACGACGACGGCGGAGGCTTTTCGACATTTGTCACGCGTTCAACGGTGAAGTCCGGTGAGAGAGATTCGGTGAGCGGAACCATGGTTCGGAGGAGTAGTGGTAGCAGTGGCAGCGGTGGTTCGGCGATGGAGAGGGCGGTAGCGAGCATGCAAGCTATGGGAGAAATTGGAATGGGGAAGCAGAAGAAAGGTAGTGGATCCTCTCAGAATGAGGAGGGGAGGCAATCGATCACAACGAAGGTTTCCACGAGTTCGATTCCGGAGAGTGTTATCAGAGAGGATCCTACAACTAAGTATGAATTGCTGAATGAACTCGGGAAGGGATCCTATGGAGCGGTTTATAAAGCAAGGGATTTAAGAACCTCTGAGATGGTTGCTATCAAAGTCATTTCATTATCTGAAGGGGAGGAAGGGTATGAGGAAATTCGTGGTGAGATTGAGATGTTACAACAATGTAATCATCCAAACGTTGTTCGGTACCTTGGAAGCTATCAAGGAGAAGAGTATCTTTGGATTGTGATGGAATACTGTGGTGGTGGTAGTGTTGCTGATCTGATGAATGTGACTGATGAAGCACTGGATGAGGGTCAAATAGCATATATCTGCAGAGAAGCGCTAAAGGGACTTGAATATTTGCACTCAATTTTCAAAGTCCATAGAGACATTAAAGGTGGGAATATCCTATTAACTGAACAAGGAGATGTCAAGCTAGGAGATTTTGGTGTTGCTGCGCAGCTTACGAGGACTATGTCGAAGCGCAATACGTTCATTGGAACCCCTCATTGGATGGCTCCAGAAGTTATTCAAGAAAGTCGATATGATGGAAAGGTTGATGTTTGGGCTCTTGGTGTGTCTGCAATTGAAATGGCCGAGGGAACACCTCCAAGATCGTCAGTGCATCCAATGAGGGTCTTATTCATGATATCCATCGAACCAGCTCCAATGCTTGAGGATAAAGAAAAATGGTCTCTATATTTCCATGATTTTGTTGCAAAATGCCTGACCAAAGAACCTCGCCTCCGTCCTACTGCAGCTGAGATGTTGAAGCATAAATTCTTTGAAAAATGGAAATCTGGATCTGCTGCAATGTTGCCAAAACTAGAAAAGGCAAGGCAAGTCAGGACTTCAATGGCTTTGCAGGTGCAAACTCCTGCTCCAGTTGCATCGGAAGATCAGCTAAATGATGAATATGGAGATACTGTTCCATCAAGACCACATAACATAGGGGTTCAAGGAGCTGCTGATCCCTCATCACATAGCACTATGAGGAAGCTGCATAGGTTGGAAGACGTGGACGCGAGTGAAGGCAACTTTGGCACTGTAATAGTCCATGGAGATGATGTACAAAAGACCAAACAGGATGTAGATTCTGCAGATTCTTTTTCTGCTTTCACCAGTGGCACAGTACGCAGATTGGATGAGTCTGGGGTTAAAAGCGTGAAAGAGTTTTCCGCAGACAGTGCCTCTTTTAGAAGATCTAGTCCTACTATGGATAACATACAATCATCTTTATCTCGTCTTAGTAATTCAACTGAACAAAACCTCAAAACAGAAAGTAGTTATCGAGCACAAGCTGGAATTGGTAGTGATCTGAGTAATAGCACATTGAAAAATGAAACAGTTAACTACAAAGCATTTGCTTTACAAGATAAGCTTTGGTCCATTTATGCAGCTGGTAACACAGTCCCCATCCCATTCTTAAGGGCAACGGATATATCACCTATAGCTCTTCTGTCAGACAATGTGCTTGGCGGTATGCAATCAGATACTAGTGGAACTGGAACAGTAGAAGCATTGCAAGAGCTTTTTAGTGGTGATGGACAGTCCAAAAAAGGCCGGAGAGGACAAAATGAGCAGATGCCACTTCCTCCAAGCATTTACCAAAGACTGACATCGAGTTCTACTCTATTAAATTTGGCACAGGCTTTAGCCTATCATAAGATGTGTTATGAAGATATGCCACTGCAGGAGCTGCAAGCAAACCAGGAACAGCGGACTATTCAAAATCTCTCCGACACACTTAGGACAATTCTTCGTTTGTAG 2469 0.4561 MDWTSSSKTRPKSDIYSTFVVHDDDDGDYGGGETNWRRKPGSSEPQDDPFSTMVFKDNGHDDDEDSSLPPLFKRLPKDFGGASLDYDDDEDSGDFGTMIVKTDRRNRPSPAGSTWKDQSSSMESALNRFRNSDDNYGDGGDDDDDGGGFSTFVTRSTVKSGERDSVSGTMVRRSSGSSGSGGSAMERAVASMQAMGEIGMGKQKKGSGSSQNEEGRQSITTKVSTSSIPESVIREDPTTKYELLNELGKGSYGAVYKARDLRTSEMVAIKVISLSEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTDEALDEGQIAYICREALKGLEYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGTPPRSSVHPMRVLFMISIEPAPMLEDKEKWSLYFHDFVAKCLTKEPRLRPTAAEMLKHKFFEKWKSGSAAMLPKLEKARQVRTSMALQVQTPAPVASEDQLNDEYGDTVPSRPHNIGVQGAADPSSHSTMRKLHRLEDVDASEGNFGTVIVHGDDVQKTKQDVDSADSFSAFTSGTVRRLDESGVKSVKEFSADSASFRRSSPTMDNIQSSLSRLSNSTEQNLKTESSYRAQAGIGSDLSNSTLKNETVNYKAFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGGMQSDTSGTGTVEALQELFSGDGQSKKGRRGQNEQMPLPPSIYQRLTSSSTLLNLAQALAYHKMCYEDMPLQELQANQEQRTIQNLSDTLRTILRL 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0928 822 MobiDBLite consensus disorder prediction 54 71 - -
Lal18g0928 822 SMART serkin_6 241 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0928 822 CDD STKc_MAP4K3_like 240 495 - -
Lal18g0928 822 Gene3D Transferase(Phosphotransferase) domain 1 237 530 - -
Lal18g0928 822 MobiDBLite consensus disorder prediction 632 663 - -
Lal18g0928 822 ProSitePatterns Protein kinases ATP-binding region signature. 247 270 IPR017441 GO:0005524
Lal18g0928 822 MobiDBLite consensus disorder prediction 17 33 - -
Lal18g0928 822 SUPERFAMILY Protein kinase-like (PK-like) 238 496 IPR011009 -
Lal18g0928 822 Pfam Protein kinase domain 241 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0928 822 MobiDBLite consensus disorder prediction 1 186 - -
Lal18g0928 822 MobiDBLite consensus disorder prediction 107 131 - -
Lal18g0928 822 ProSiteProfiles Protein kinase domain profile. 241 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0928 822 MobiDBLite consensus disorder prediction 199 234 - -
Lal18g0928 822 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 183 812 - -
Lal18g0928 822 MobiDBLite consensus disorder prediction 204 233 - -
Lal18g0928 822 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 183 812 - -
Lal18g0928 822 MobiDBLite consensus disorder prediction 150 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0928 Lal-Chr18 12100074 12114159 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Lal18g0928 Pkinase 7.5e-70 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0928 18 12100074 12114159 Lal18g0928 18 12100074 12114159 ECH