Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0917 ATGTTTTCTCTGTCTCTTAGTAGTTCTGCCATGAACATGCCCAGCAAGAAAATGAGAAAACCTTCCAACGTTGTAGCTGAAGCTAATGGCTTCCCTTCTTTTCTTCCCAAAGAAGTTGAGAGAATCCAAGACCCTTTTGCTAGAAAACTTGCTTTGCGGATTCAGAGACTACCTGTGCCTGTGAGGTTCTCAGAAAATCCCATCATGAGTAGTTGTGTGAAGCCACTGATGCAAGGGAAGGAAACTCCGGTTGTTCTTCTACATGGTTTTGACAGCTCATGTTTAGAATGGAGATATGCATATCCATTGCTTGAGGAATCTGGTTTTGAGACTTGGGCTATTGATATTCTTGGTTGGGGTTTCTCTAATTTAGAAAAACTTCCTCCTTGTGATGTGGTATCAAAGCGCAACCACTTCTATCAGCTTTGGAAGTCCTACATCAAAAGGCCAATGATATTGGTTGGACCAAGCCTTGGCTCTGCTGTTGCTATTGACTTTTCTGTCAATTATCCTGAAGCTGTGGAAAAGCTTGTTTTGATTGATGCTAGTGTATATGCAGAAGGAACAGGAAATCTAGCAACCTTACCTAGAGCTGTAGCCTATGCTGGGGTTAATTTATTGAAGAGCACTCCATTACGCTTTTATGTCAACTATTTGAATGCCTCCACTAGAGAATCTTTCAGTACGACCCTTGACTGGACTAATGTGGGACGATTGCATTGCCTAATGCCTTGGTGGGATGATGCTACTGTGGATTTTATGACTAGTGGTGGTTACAATGTTGCTTCCCTAATAGGAAAGGTAAAGCAGAAAACACTAATAATTTGGGGTGAAAATGACCGCATCATAAGCAACAGGCTTGCAGTGCAACTTCATTGTGAATTACCTGATGCAATTATACGCCAAATACCGAACTGTGGCCATCTTCCTCATGTTGAAAGACCAGATTCTGTTGTAAAATTAATTGCTGAGTTTGTTCAAAGTGAAAATGAGGCCAAGAAATTAAGTCTATGTCAATATTTTTAG 1026 0.4084 MFSLSLSSSAMNMPSKKMRKPSNVVAEANGFPSFLPKEVERIQDPFARKLALRIQRLPVPVRFSENPIMSSCVKPLMQGKETPVVLLHGFDSSCLEWRYAYPLLEESGFETWAIDILGWGFSNLEKLPPCDVVSKRNHFYQLWKSYIKRPMILVGPSLGSAVAIDFSVNYPEAVEKLVLIDASVYAEGTGNLATLPRAVAYAGVNLLKSTPLRFYVNYLNASTRESFSTTLDWTNVGRLHCLMPWWDDATVDFMTSGGYNVASLIGKVKQKTLIIWGENDRIISNRLAVQLHCELPDAIIRQIPNCGHLPHVERPDSVVKLIAEFVQSENEAKKLSLCQYF 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0917 341 PRINTS Alpha/beta hydrolase fold signature 108 123 IPR000073 -
Lal18g0917 341 PRINTS Alpha/beta hydrolase fold signature 153 166 IPR000073 -
Lal18g0917 341 PRINTS Alpha/beta hydrolase fold signature 167 180 IPR000073 -
Lal18g0917 341 PRINTS Alpha/beta hydrolase fold signature 272 286 IPR000073 -
Lal18g0917 341 Gene3D alpha/beta hydrolase 74 336 IPR029058 -
Lal18g0917 341 PRINTS Epoxide hydrolase signature 88 106 IPR000639 GO:0003824
Lal18g0917 341 PRINTS Epoxide hydrolase signature 108 123 IPR000639 GO:0003824
Lal18g0917 341 PRINTS Epoxide hydrolase signature 167 180 IPR000639 GO:0003824
Lal18g0917 341 PRINTS Epoxide hydrolase signature 303 325 IPR000639 GO:0003824
Lal18g0917 341 PANTHER ALPHA/BETA FOLD HYDROLASE 16 338 - -
Lal18g0917 341 PANTHER HYDROLASE 16 338 - -
Lal18g0917 341 Pfam Alpha/beta hydrolase family 84 320 IPR000073 -
Lal18g0917 341 SUPERFAMILY alpha/beta-Hydrolases 79 327 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0917 Lal-Chr18 11976728 11983826 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0917 18 11976728 11983826 Lal18g0917 18 11976728 11983826 ECH
Lal22g0701 22 5054690 5058124 Lal18g0917 18 11976728 11983826 LSH
Lal6g0796 6 5349363 5355045 Lal18g0917 18 11976728 11983826 LSH
Lal16g0800 16 5185883 5191695 Lal18g0917 18 11976728 11983826 PCT
Lal18g0917 18 11976728 11983826 Lal16g0800 16 5185883 5191695 PCT