Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal18g0916 | ATGACTCTTTTAGTGTACTTTGTGTTTTTTATGTTCCTTACTAGCCATTCAAGTGCAAATTACTGTCTATGCAAAGATGGTGTGGGTGATCAAGCACTTCAGAAAGCAATAGATTATGCTTGTGGTGCTGGAGCTGATTGTGCGCCTATTATGCAAAATGGACCATGTTTCCAACCAAACACTGTTAAGGATCATTGCAATTATGCTGTTAATAGCTATTTTCAGAGAAAGGGTCAAGTTCAAGGTAGCTGTGATTTTAGTGGAGCTACTACCCCTAGTGTAACTGCACCACCTACTTCAACATCTACATGTGTTTTCCCCTCAAGTCCTAGCAATGCTGGAACAAGCACCACCACAACCCCAACAACTACTACACCAGGCACATCATCATCATCTTCCACTCTAACACCACCAACAAGTACCACACCAATAGGTACATCTCCAGGAATGGGCACAGGTACAATAACAGGGAGTCCTAATGTGTTTGGAATTAGTCCAACATCTTCAACTGGCTTCACTGACCCAAACCATGGAGTGGTTAATGTGATGGGCACTAATGTATTACTATTATCTCTTGTTTTTACCTTTTGGTTACTAGCATTAAGGGTCTAA | 612 | 0.4134 | MTLLVYFVFFMFLTSHSSANYCLCKDGVGDQALQKAIDYACGAGADCAPIMQNGPCFQPNTVKDHCNYAVNSYFQRKGQVQGSCDFSGATTPSVTAPPTSTSTCVFPSSPSNAGTSTTTTPTTTTPGTSSSSSTLTPPTSTTPIGTSPGMGTGTITGSPNVFGISPTSSTGFTDPNHGVVNVMGTNVLLLSLVFTFWLLALRV | 203 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal18g0916 | 203 | MobiDBLite | consensus disorder prediction | 91 | 169 | - | - | |
| Lal18g0916 | 203 | PANTHER | CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN | 1 | 167 | - | - | |
| Lal18g0916 | 203 | Gene3D | - | 15 | 132 | - | - | |
| Lal18g0916 | 203 | Pfam | X8 domain | 21 | 90 | IPR012946 | - | |
| Lal18g0916 | 203 | SMART | X8_cls | 20 | 106 | IPR012946 | - | |
| Lal18g0916 | 203 | PANTHER | BETA-1,3 GLUCANASE | 1 | 167 | IPR044788 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal18g0916 | Lal-Chr18 | 11970065 | 11972127 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lal18g0916 | 18 | 11970065 | 11972127 | Lal18g0916 | 18 | 11970065 | 11972127 | ECH | |
| Lal6g0797 | 6 | 5356527 | 5358825 | Lal18g0916 | 18 | 11970065 | 11972127 | LSH | |
| Lal16g0803 | 16 | 5197805 | 5198999 | Lal18g0916 | 18 | 11970065 | 11972127 | PCT | |
| Lal15g0773 | 15 | 5530488 | 5531900 | Lal18g0916 | 18 | 11970065 | 11972127 | PCT | |
| Lal23g0828 | 23 | 10734683 | 10736211 | Lal18g0916 | 18 | 11970065 | 11972127 | PCT | |
| Lal18g0916 | 18 | 11970065 | 11972127 | Lal16g0803 | 16 | 5197805 | 5198999 | PCT | |
| Lal18g0916 | 18 | 11970065 | 11972127 | Lal15g0773 | 15 | 5530488 | 5531900 | PCT | |
| Lal18g0916 | 18 | 11970065 | 11972127 | Lal23g0828 | 23 | 10734683 | 10736211 | PCT |