Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0623 ATGCACAACATGACCGACCAAGAGTTGTTCCTTAAAGCATCTATGGTTCAAGGAATTGAAGATAACAACACAATCCCAAGAGTGGCTTTCATGTTCTTAGCACAAGGTGCATTGCCAATGGCACCTTTGTGGGAGAAATTCTTCAAAGGCCATGAAGGTTTTTACTCCATTTACTTGCACCAACACCCTTCTTTCAATGAAACCTTGCCACAAGGTTCTGTGTTCCATGGAAGAAAAGTTCCTAGCCAGCCAGTGACATGGGGCACATCATCAATGATAGATGCTGAGAGAAGACTGTTGGGAAATGCACTAATGGACTCATCCAACCAACGTTTTATATTACTCTCAGAATCATGCATTCCATTATTTGGCTTCAAATCAATATACAACTATCTCATCAACTCAACCCTAAGCTTTGTAAACTCATTTGATGACAAAAGAAAAGCTGGTAGAGGAAGATACAATCCAAAAATGTCACCTATAATTAACATAACCAATTGGCGAAAAGGGTCTCAATGGTTTGAATTGCACCGTGATCTTGCAATTCATATTGTTTCTGACACTAAATACTACACACTATTTCAGCAACATTGTCTTCAACCATGTTACCCAGATGAACATTATATTCCAACATTTGTTCATATGATGTACCCTGAATTGAACTCTAATCGTAGTCTCACTTATGTGGATTGGTCAAAGGGTGGTGCTCATCCAAGGAAGTTTGGGTTACGTGATATTACAAATGAGTTCTTTAATCAAACTAGTTATGGTTCAAGATGTGTTTATAATGGGAAAATCACCAATATGTGTTTTCTTTTTGCAAGGAAGTTTGATCCTAGTACATTGCAGCCTTTATTGCGAGTATCCTCTTCCCATGAATAA 882 0.381 MHNMTDQELFLKASMVQGIEDNNTIPRVAFMFLAQGALPMAPLWEKFFKGHEGFYSIYLHQHPSFNETLPQGSVFHGRKVPSQPVTWGTSSMIDAERRLLGNALMDSSNQRFILLSESCIPLFGFKSIYNYLINSTLSFVNSFDDKRKAGRGRYNPKMSPIINITNWRKGSQWFELHRDLAIHIVSDTKYYTLFQQHCLQPCYPDEHYIPTFVHMMYPELNSNRSLTYVDWSKGGAHPRKFGLRDITNEFFNQTSYGSRCVYNGKITNMCFLFARKFDPSTLQPLLRVSSSHE 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0623 293 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 1 289 IPR044174 GO:0016757
Lal18g0623 293 Pfam Core-2/I-Branching enzyme 28 253 IPR003406 GO:0016020|GO:0016757
Lal18g0623 293 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 1 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0623 Lal-Chr18 5418338 5420146 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0623 18 5418338 5420146 Lal8g0437 8 2936695 2941188 ECH
Lal18g0623 18 5418338 5420146 Lal18g0623 18 5418338 5420146 ECH
Lal22g1376 22 16668811 16671218 Lal18g0623 18 5418338 5420146 ECH
Lal18g1021 18 13217360 13226196 Lal18g0623 18 5418338 5420146 ECH