Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0076 ATGGCAACCCTTGTTGTTCCAAACCAAACTTCTCCTCTTGAAGATGCTGAAGCTCTCCATAAGGCTTTCAAGGGATGGGGGGCAGATAATAAGGCCATTATAGCAATACTAGGGCACAGAAATGTTAGTCAGAGGCAGGAAATTAGAAAAGCTTATGAGGAACTATTCCAAGAGGATCTCATCAAACGCCTTGAGTCTGAGATCTCTGGTGACTTTGAGAAAGCTGTGTACCGCTGGATGTTGGAACCTGCAGACCGTGATGCTGTTTTGGCCAATGTAGCAATCAGGAATGGCAATAAAGACTACAATGTTGTAGTGGAAATTGCTTGTGTCCTATCAGCTGAAGAGCTCTTGGAAATGAGGCGCGCTTATCACAACCGCTACAAGCGATCCTTGGAAGAAGATCTTTTGGTTGGATTGGTGAGCATATTTAGGTATGAGGGTGATGAAGTTAATGCAAGATTGGCCCAAACTGAAGCTAACATTCTTCATGAATCTGTCAAAGAGAAGAAAGGAAACTATGAAGAAGTCATCAGGATCCTTACTACAAGGAGCAAAACTCAACTCGTAGCGACTTTCAATCGCTACAGAGATGAGCATGCCATTTCCATCAGTAAGAAATTGTTGGATCAAACATCTGATGACTTCCACAAGGCATTGCACACAGCTATTCGTTGTATCAATGACCATAAGAAGTACTATGAAAAGGTTCTGCGCCATGCTATAAAAAAATTTGGAACTGATGAGGATGGACTTAGTCGTGTGGTGGTGACAAGGGCTGAGAAAGATTTGAAGGACATAAAAGGGCTCTACTATAAGAGAAACAGTGTTCATCTTGAGGATGCAGTGGCTAAGGATATTTCAGGGGACTACAAGAAGTTCATTCTCACTCTCTTGGGAAAATAA 906 0.4227 MATLVVPNQTSPLEDAEALHKAFKGWGADNKAIIAILGHRNVSQRQEIRKAYEELFQEDLIKRLESEISGDFEKAVYRWMLEPADRDAVLANVAIRNGNKDYNVVVEIACVLSAEELLEMRRAYHNRYKRSLEEDLLVGLVSIFRYEGDEVNARLAQTEANILHESVKEKKGNYEEVIRILTTRSKTQLVATFNRYRDEHAISISKKLLDQTSDDFHKALHTAIRCINDHKKYYEKVLRHAIKKFGTDEDGLSRVVVTRAEKDLKDIKGLYYKRNSVHLEDAVAKDISGDYKKFILTLLGK 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0076 301 ProSiteProfiles Annexin repeat profile. 10 81 IPR018502 GO:0005509|GO:0005544
Lal18g0076 301 SUPERFAMILY Annexin 3 300 IPR037104 GO:0005509|GO:0005544
Lal18g0076 301 Gene3D Annexin 1 81 IPR037104 GO:0005509|GO:0005544
Lal18g0076 301 Gene3D Annexin 154 228 IPR037104 GO:0005509|GO:0005544
Lal18g0076 301 SMART annex3 99 140 IPR018502 GO:0005509|GO:0005544
Lal18g0076 301 SMART annex3 27 79 IPR018502 GO:0005509|GO:0005544
Lal18g0076 301 SMART annex3 171 223 IPR018502 GO:0005509|GO:0005544
Lal18g0076 301 SMART annex3 246 298 IPR018502 GO:0005509|GO:0005544
Lal18g0076 301 PRINTS Annexin family signature 24 46 IPR001464 GO:0005509|GO:0005544
Lal18g0076 301 PRINTS Annexin family signature 64 80 IPR001464 GO:0005509|GO:0005544
Lal18g0076 301 PRINTS Annexin family signature 91 112 IPR001464 GO:0005509|GO:0005544
Lal18g0076 301 PRINTS Annexin family signature 242 262 IPR001464 GO:0005509|GO:0005544
Lal18g0076 301 PRINTS Annexin family signature 286 299 IPR001464 GO:0005509|GO:0005544
Lal18g0076 301 PANTHER ANNEXIN 6 301 - -
Lal18g0076 301 Gene3D Annexin 231 301 IPR037104 GO:0005509|GO:0005544
Lal18g0076 301 ProSiteProfiles Annexin repeat profile. 154 225 IPR018502 GO:0005509|GO:0005544
Lal18g0076 301 ProSitePatterns Annexin repeat signature. 246 298 IPR018252 GO:0005509|GO:0005544
Lal18g0076 301 Gene3D Annexin 82 138 IPR037104 GO:0005509|GO:0005544
Lal18g0076 301 PANTHER ANNEXIN 6 301 - -
Lal18g0076 301 Pfam Annexin 15 76 IPR018502 GO:0005509|GO:0005544
Lal18g0076 301 Pfam Annexin 87 136 IPR018502 GO:0005509|GO:0005544
Lal18g0076 301 Pfam Annexin 236 298 IPR018502 GO:0005509|GO:0005544
Lal18g0076 301 Pfam Annexin 160 221 IPR018502 GO:0005509|GO:0005544
Lal18g0076 301 PRINTS Plant annexin signature 118 132 IPR009118 -
Lal18g0076 301 PRINTS Plant annexin signature 214 232 IPR009118 -
Lal18g0076 301 ProSiteProfiles Annexin repeat profile. 229 300 IPR018502 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0076 Lal-Chr18 604593 607062 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0076 18 604593 607062 Lal2g0764 2 4899193 4902906 PCT
Lal2g0764 2 4899193 4902906 Lal18g0076 18 604593 607062 PCT