Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0034 ATGGACATGATTCAAGCTACATTGGAGAAGATAGGATTGAATTCCAAGAAGAAACTCACAGCATTCTTTATTATAATTTTCATAGCTTTCCCTGTTACTCTCACTGTTACCAACAAATTCAGAAAATCAAGCTTCTCAATTTTTGAGGGTTCTTCTCAAAACAAGGTATTACAAGGTGAAACAGGTCAGAAAAATGGTACAACTGAGTTGTTGAATGGAAAGTCAAATGTTACAAACAATGGCTCAGGATTGAAAGGAAGTGTCCAAAATGATACAGATAGGCAAATTACAGCATCAAAAGAAGATATTGCAAATCCAGATGGCAAAGACAAAAATGTCTCATCAACAAGTCCATCAAATGTTTCAACCCCACATATTCCAAATCCACATTACAAAGGTAAAGATGCTTCAACAACAAGTCCACTGAATGTTTCAACCCCACATACTGTGAATCCATATAACAAAGATAAAAATGCATCATCGACAAGTCCAACAAATGTTTCAACCCCACATACTGCGAATCCAAATGAAAAAGATAAAAATGCATCATCGACAAGTCCAGCAAATGTTTCAACCCCACATAGTGCAAATTCAAATGACAAAGATGAAAATGGATCATCGACGAGTTTACCAAATGTTTCAACACCACATACTGCGAATATAGATGACAAAGATAAAAATGCTTCATCGACAAGTCTACCAAATGTTTCAACCCCACATACTGCGAATCAACATGACAAAGATAAAAATGTTCCATCGACAAATCCACCAAATGTTTCAATCCCACATACTGTGAATCCAGATGACAAAGATAAAAATGTTTCATCCACAAGTCCACCAAATGTTTCAACCCCACCAACTACGAATCCAGCGGACAAAGATAAAAATGCTTCATCAACAAGTCCAACAAATGTTTCAACACCGCATACTGCGAATCCAGTTGACAAAGACAAAAATGCTTCAACAACAAGTCCACCAAAGGATTCAATTCATGATGACAAAGACAAATTGATTGATGGACTTTTGGCTTCTGGATTTGATGAAGCATCATGCACAAGCAGGTTTCAGTCTCACTTGTTCCGAAAACCTTCTCATCACAAACCTTCTCAATACCTGATATCAAAACTGCGCCACTATGAAGAGCTTCATAGAAAATGTGGTCCTAATAGTAGAGGTTTTCACAGAAACATGAAGGTTCTACAATCTAAGAAAAAGGATGCAGTTGGAATTTGTAAATACCTTGTTTGGACACCTGCAAATGGCTTAGGGAACAGAATGATTAGCTTGGCTGCAACATTTCTTTATGCTATCTTCGCAGATCGAGTTCTACTTGTAAGATTTCATAATGACATGCGGGGCCTATTTTGCGAACCATTTCTCAATTCAACTTGGTTATTGCCAAAGGATTCTCCATTTTGGGGTGAAAAAAATGTTGAGACATATAAGACAATGTTAAAGATGGATAAAGCTAGCCATTCAAAGAGGGCATTACCATCAACTTTGTTTCTAAATCTACGACCAGATAAATTTTTCCATTGTGATCACAATCAAGATCTTCTAAGGAATATAACTTTGTTGATTTTGCAGTCAGATCAATATTTTGTCCCACATTTGTTCTTAAACCCATATTTCAACTCGGAGATTAACAAAATGTTCCCTGAAAATGACGCAATTTTCCACCATTTGGCGCGCTACCTTTTCCACCCTTCAAATGAGGCATGGGGACTAATCAGCAGATTCTATCAAACATACTTAGCTTCAGCAAATGAGAAAATTGGCCTTCAGATAAGGGTATTTTCTCCTACTACTACCCCAATGCAAGCAATTATGGACTTAGTTTTAAATTGCACCATAAGTAATAATCTCCTTCCAGCATTGGATACACAAAATTTAGTATCTTATAGTAAAAACCAGACTGTAAAGGTTGTTCTTGTAGCATCTTTATTTCCAGAATATGGTGAGAATTTAAGAGCTATGTATCTGACTAAACCAAGTGTTAGCGGAGAATTAATTGGAGTTTATCAACCAAGTCATGAAAAGCAACAAAAGTTCTATAATAACATGCATAACATTAAGGCATGGAGTGAAATGTATCTACTAAGTTTATCTGATGTGTTGGTTACAACTTCTCTATCAACTTTTGGTTATGTGGCTCAAGGTTTGGGAGGTTTGAAGCCATGGCTTCTTTACAGGTTGACTAATAATGAAACTCATTTTCCAGCATGTGTAAGGGACTTTTCAATTGAGCCATGTAATCATATTCCTCCTAAGCATTTTTGCAATGGGAAGCCTATACAGAATTTTGCTTCTTCTTTCCCTTATTTGAGGGAATGCTTAGATTTTTCTTTTGGAGTCAAATTGGGTAATACTTCTTCCACATAG 2382 0.3636 MDMIQATLEKIGLNSKKKLTAFFIIIFIAFPVTLTVTNKFRKSSFSIFEGSSQNKVLQGETGQKNGTTELLNGKSNVTNNGSGLKGSVQNDTDRQITASKEDIANPDGKDKNVSSTSPSNVSTPHIPNPHYKGKDASTTSPLNVSTPHTVNPYNKDKNASSTSPTNVSTPHTANPNEKDKNASSTSPANVSTPHSANSNDKDENGSSTSLPNVSTPHTANIDDKDKNASSTSLPNVSTPHTANQHDKDKNVPSTNPPNVSIPHTVNPDDKDKNVSSTSPPNVSTPPTTNPADKDKNASSTSPTNVSTPHTANPVDKDKNASTTSPPKDSIHDDKDKLIDGLLASGFDEASCTSRFQSHLFRKPSHHKPSQYLISKLRHYEELHRKCGPNSRGFHRNMKVLQSKKKDAVGICKYLVWTPANGLGNRMISLAATFLYAIFADRVLLVRFHNDMRGLFCEPFLNSTWLLPKDSPFWGEKNVETYKTMLKMDKASHSKRALPSTLFLNLRPDKFFHCDHNQDLLRNITLLILQSDQYFVPHLFLNPYFNSEINKMFPENDAIFHHLARYLFHPSNEAWGLISRFYQTYLASANEKIGLQIRVFSPTTTPMQAIMDLVLNCTISNNLLPALDTQNLVSYSKNQTVKVVLVASLFPEYGENLRAMYLTKPSVSGELIGVYQPSHEKQQKFYNNMHNIKAWSEMYLLSLSDVLVTTSLSTFGYVAQGLGGLKPWLLYRLTNNETHFPACVRDFSIEPCNHIPPKHFCNGKPIQNFASSFPYLRECLDFSFGVKLGNTSST 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0034 793 Gene3D - 409 461 - -
Lal18g0034 793 MobiDBLite consensus disorder prediction 225 241 - -
Lal18g0034 793 PANTHER FUCOSYLTRANSFERASE 2-RELATED 15 791 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lal18g0034 793 MobiDBLite consensus disorder prediction 248 262 - -
Lal18g0034 793 MobiDBLite consensus disorder prediction 57 334 - -
Lal18g0034 793 MobiDBLite consensus disorder prediction 57 94 - -
Lal18g0034 793 MobiDBLite consensus disorder prediction 109 126 - -
Lal18g0034 793 MobiDBLite consensus disorder prediction 271 326 - -
Lal18g0034 793 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 15 791 - -
Lal18g0034 793 Pfam Xyloglucan fucosyltransferase 323 760 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lal18g0034 793 MobiDBLite consensus disorder prediction 133 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0034 Lal-Chr18 226284 229027 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0034 335 787 Xyloglucan Fucosyltransferase1 AT2G03220 49.465 2.52e-153 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0034 K13681 - gmx:100809919 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1257 20 17079518 17082327 Lal18g0034 18 226284 229027 LSH
Lal1g1214 1 13385449 13388148 Lal18g0034 18 226284 229027 LSH
Lal25g0019 25 150581 156709 Lal18g0034 18 226284 229027 PCT
Lal18g0034 18 226284 229027 Lal25g0019 25 150581 156709 PCT