Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0117 ATGGAGACACGCGCCGCCAAGAGGAAAGCTATCGCCGCCACCGTTTCTGATATTCAAGACCAAAACATCAAGAAACAACGCCTTGTGTTGTCTGAAATTACCAACTTGCCCAATTTCGATGAGGAACCCAGATGTGTGAAGAATCCAAGGATCAAGAGGGTTGCAGCAAAGAAGACCCTTTCATCTCTTGATTCCGATTTCGATGATGAGAATAATAGTAAAGCAGTTGATAATTGCAGTTATGCAAAATCAAACACTAATGTCAAGTTCAGTGACCCAAAGAACTGTGAACATTTTGTTGATGACATATATTCGTATCTTTGCAGAATGGAGAGGGAGGGAAAGAGAAGACCAATGTTCAATTACATTGAGAATGTTCAGCAAGATGTTACCCCTCATATGAGAGGGATCTTAGTGGATTGGTTGGTTGAGGTTGCAGAAGAGTATAAGCTTCTCCCAGACACTCTTTTTCTTTCAACATCATACATTGATAGGTTTCTGTCTCACAACCGTGTTTCTAAGCCCAAGCTTCAGCTGTTGGGAGTTTCTTCAATGCTCATTGCAGCTAAGTATGAAGAAATAACCCCACCCCATGTGGAAGATTTTGTGTTGATCACTGATAACACTTATGACAAGGCAGAGGTAGTGAAAATGGAAGCTGATATTCTCAAATCCCTAAGTTTTGAGATGGGTAATCCTACTGTTAAGACCTTTTTAAGGAGATTTTCTGGTATTAGTTGTGAGGGTACCAAAGCTAAAAAATCGCAGTTCGAGTGTTTATGTAACTATCTTGCTGAGCTAAGTTTGTTAGAGTATTGTTGTTTGAAGTTTTTGCCTTCTTTGGTGGCTGCATCCGCTACATTTCTTGCTAGATATATCATGTGGCCAAAATTGCATCCTTGGACTTCAACCCTGTGTAAATCCACTGGGTATGATGCAGCTGAGTTGAAAGAATGTGTTCTAATCTTACATGACTTGTACTTGGCAAGAAGGGGAGGTTCCTTCCAAGCCATTAGGGAGAAATACAAGCAGCAGAAGTTGAAAAATGTGGCAGATCTTCCTTCCCCTCCACGGGTGCCAAATTTTCTCTTTGATGAAGAGTAA 1104 0.4085 METRAAKRKAIAATVSDIQDQNIKKQRLVLSEITNLPNFDEEPRCVKNPRIKRVAAKKTLSSLDSDFDDENNSKAVDNCSYAKSNTNVKFSDPKNCEHFVDDIYSYLCRMEREGKRRPMFNYIENVQQDVTPHMRGILVDWLVEVAEEYKLLPDTLFLSTSYIDRFLSHNRVSKPKLQLLGVSSMLIAAKYEEITPPHVEDFVLITDNTYDKAEVVKMEADILKSLSFEMGNPTVKTFLRRFSGISCEGTKAKKSQFECLCNYLAELSLLEYCCLKFLPSLVAASATFLARYIMWPKLHPWTSTLCKSTGYDAAELKECVLILHDLYLARRGGSFQAIREKYKQQKLKNVADLPSPPRVPNFLFDEE 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0117 367 Gene3D - 102 352 - -
Lal17g0117 367 SUPERFAMILY Cyclin-like 233 357 IPR036915 -
Lal17g0117 367 PIRSF Cyclin_A_B_D_E 2 361 IPR039361 -
Lal17g0117 367 SUPERFAMILY Cyclin-like 91 230 IPR036915 -
Lal17g0117 367 SMART cyclin_7 140 224 IPR013763 -
Lal17g0117 367 SMART cyclin_7 237 325 IPR013763 -
Lal17g0117 367 Pfam Cyclin, N-terminal domain 102 230 IPR006671 -
Lal17g0117 367 Gene3D - 116 231 - -
Lal17g0117 367 PANTHER CYCLINS 19 365 IPR039361 -
Lal17g0117 367 PANTHER CYCLIN-A3-1-RELATED 19 365 - -
Lal17g0117 367 Pfam Cyclin, C-terminal domain 233 355 IPR004367 -
Lal17g0117 367 CDD CYCLIN 134 223 IPR013763 -
Lal17g0117 367 SMART Cyclin_C_2 233 356 IPR004367 -
Lal17g0117 367 CDD CYCLIN 233 324 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0117 Lal-Chr17 719787 721874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0117 3 366 Core Cell Cycle Gene Families AT5G43080 51.099 5.38e-122 354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0117 17 719787 721874 Lal17g0117 17 719787 721874 ECH
Lal10g0841 10 15996194 16000132 Lal17g0117 17 719787 721874 PCT
Lal17g0117 17 719787 721874 Lal10g0841 10 15996194 16000132 PCT