Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0068 ATGTCTTCTTCCCTTCTCTTTCTCCCTTTTCTCCTCTTCCTCCACATTCTCCTCCCCACCAAGACAGAATCTGGCGGTGGCAACGGAGAATGGCAACTTCTACAAAACAGCATTGGCGTCGTAGCCATGCACATGCAGCTACTCCACAACGACCGTGTCGTCATTTTCGACCGAACCGATTTCGGCTTATCAAAGTTGAAATTAGCCGGTGGAAAATGTCGTCACGACCCAACTGAGCTAGTTGTTAAAACAGACTGCACCGCTCACTCGGTCGAATACGACGTCGCAGGCAACACATTCAGACCGTTATTCGTCCAAACCAACGTCTGGTGCTCCTCCGGTTCAGTTGCACCAGACGGCACTCTGGTTCAGACCGGAGGGTCCTTCGATGGAGAACGAGCTGCTAGAATATTCAAACCATGTGCCACGTGTGACTGGAAAGAAGTTCAGTTTGGCCTCTCAGTTCGAAGATGGTATTCCACCAATCAAATATTGCCAGATGGAAAGCAAATAATAATTGGAGGGAGAAGGCAATTTAACTACGAGTTTTACCCCAAAAACGACGCCGCAGCGAATAACGTATACAGTTTACCGTTTTTAGTTCAGACCAATGACCCCGCAGAGAATAATCTTTACCCCTTTGTTTTTTTAAACGTGGACGGTAATTTATTCATCTTCGCTAATAACCGCGCTATTTTGTTTGATTACAGTAATGGTAGGGTTGTTAGGACATACCCTACGATACCCGGCGGTGATCCCAGAAACTACCCTAGTACCAGTTCCGCGGTTTTGCTTCCATTGAGAAACCTACAAGCAAAAAATATTGAAGCAGAGGTTTTGATTTGCGGTGGTGCTCCAAAAGGTTCTTTTGAAAAAACATTAAGGGGTGAGTTTATGGGAGCCTTGAATACTTGTGGGAGAATTAAAATTACAGACCCGAACCCGAAGTGGGTTATGGAGAAAATGCCAGGTGGCAGAGTAATGAGTGATATGGTGATGCTCCCAAACGGCAACGTTTTGATTATCAATGGAGCTGCTGCGGGGAGTGCTGGTTGGGAATCAGGGCGGAACCCGGTTCTGAACCCGTTTCTTTATAAAACAAATAACCCGGTCGGTTCACGGTTCGTGATGCAAAAACCGTCCGCGATTCCAAGAATGTATCATTCCACGGCGGTTTTGTTACGTGATGGTCGTGTACTTGTTGGTGGGAGCAACCCTCATATGGGTTATAATTTCAGCAATGTGTTATTTCCAACGGAATTGAGGTTGGAAACTTTCTCTCCTTCGTATTTGGACCCTGGATCCAACAACGTGCGACCCACAATCTTGTTCCCTGCTTCCCAATCAAAAGTAAAGTACGGTCAAAAGTTAAAGGTGCGGTTCCATGTGGCAGCCACGTTGGATAGAAATGCTGTGTCGGTTACAGTTTTGGCGCCACCTTTTACCACGCACTCTTTCTCTATGAATCAGAGGCTGTTAGTGCTGGAACCGAATGTTTTGAATGATGTTGGAAAGTCAAGTTACGAGGTTGAAGTGACCACGCCCGGTTCACCTATTCTTGCACCACCTGGTTTTTATTTGGTATTTGTGGTCCACCGAGATATTCCAAGCCACGGTATATGGGTCCAGATCATGTGA 1638 0.4628 MSSSLLFLPFLLFLHILLPTKTESGGGNGEWQLLQNSIGVVAMHMQLLHNDRVVIFDRTDFGLSKLKLAGGKCRHDPTELVVKTDCTAHSVEYDVAGNTFRPLFVQTNVWCSSGSVAPDGTLVQTGGSFDGERAARIFKPCATCDWKEVQFGLSVRRWYSTNQILPDGKQIIIGGRRQFNYEFYPKNDAAANNVYSLPFLVQTNDPAENNLYPFVFLNVDGNLFIFANNRAILFDYSNGRVVRTYPTIPGGDPRNYPSTSSAVLLPLRNLQAKNIEAEVLICGGAPKGSFEKTLRGEFMGALNTCGRIKITDPNPKWVMEKMPGGRVMSDMVMLPNGNVLIINGAAAGSAGWESGRNPVLNPFLYKTNNPVGSRFVMQKPSAIPRMYHSTAVLLRDGRVLVGGSNPHMGYNFSNVLFPTELRLETFSPSYLDPGSNNVRPTILFPASQSKVKYGQKLKVRFHVAATLDRNAVSVTVLAPPFTTHSFSMNQRLLVLEPNVLNDVGKSSYEVEVTTPGSPILAPPGFYLVFVVHRDIPSHGIWVQIM 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0068 545 Gene3D Immunoglobulins 439 545 IPR013783 -
Lal17g0068 545 PANTHER SECRETED PROTEIN-RELATED 26 544 - -
Lal17g0068 545 Pfam Galactose oxidase-like, Early set domain 439 544 IPR015202 -
Lal17g0068 545 Gene3D - 26 438 IPR037293 -
Lal17g0068 545 CDD E_set_GO_C 434 544 IPR015202 -
Lal17g0068 545 Pfam Glyoxal oxidase N-terminus 43 284 IPR009880 -
Lal17g0068 545 SUPERFAMILY E set domains 436 544 IPR014756 -
Lal17g0068 545 PANTHER OXIDASE, PUTATIVE, EXPRESSED-RELATED 26 544 - -
Lal17g0068 545 SUPERFAMILY Galactose oxidase, central domain 92 432 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0068 Lal-Chr17 400265 401902 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0068 17 400265 401902 Lal17g0068 17 400265 401902 ECH
Lal17g0068 17 400265 401902 Lal21g0126 21 856499 858532 LSH
Lal17g0068 17 400265 401902 Lal4g0080 4 473023 474657 LSH
Lal8g0549 8 3792892 3798082 Lal17g0068 17 400265 401902 PCT