Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1433 ATGTGCAACAAATGTGGAAGACTCCATTATGGGAGCACATGCCTGAGATCGGGAAATGGATGTTTCCACTGCAAGGAGTTAGGGCACATTAAAAGGTTTTGTCCCAAGCTGGATCGGAGACTTAATGTCATTCATGTTGAGAGGGCAAGGGACCATGGTCGAGTGGTTGCCCCAAGTGGCATAGGGACATCAGGTGTTGATGAACCAGTTAAAGGTGGCACCCTCCGCGACATCCCAATCGGCGGTGGCAACCGCAAGAACACTAAACGGTCTCGTACACTTCACAACAACAATGTTTCTAATTCCATTTCCTCTTCTTCTACTATGACTTCTTCAACATTTTCATTGGAGAATTTGAATGTTAGTGTGAACGTGTGTAGTGGTGAGATTAGGAGTTTCTCTTCGTTGTTGAATAACACAGAAGGATCTTCTGCTTCTGGGTTTGGTCATGGATTTGAAGAGATAGAGTTTGAGGTTGGAAGAGCAGATTGGAGTTTTCCAGGAATGGTAGCAGCTGCTGCTAACATTAGTGGCAGCGTTGCGGCTTCTGGTGGCGGCGCGTTCCAGTTAGAAGGTGGAGAAGCCAGTTATGTTGGTGGTAGAGACTATTTCTCTTCGCTTGGACTATTACTGGAATGTGAGTTTAGTGCAATCAAAATTGTGGGTTTAACAGTTGAGTTGTGA 684 0.4547 MCNKCGRLHYGSTCLRSGNGCFHCKELGHIKRFCPKLDRRLNVIHVERARDHGRVVAPSGIGTSGVDEPVKGGTLRDIPIGGGNRKNTKRSRTLHNNNVSNSISSSSTMTSSTFSLENLNVSVNVCSGEIRSFSSLLNNTEGSSASGFGHGFEEIEFEVGRADWSFPGMVAAAANISGSVAASGGGAFQLEGGEASYVGGRDYFSSLGLLLECEFSAIKIVGLTVEL 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1433 227 SMART c2hcfinal6 20 36 IPR001878 GO:0003676|GO:0008270
Lal16g1433 227 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 71 198 IPR045174 GO:0003700|GO:0006355
Lal16g1433 227 SUPERFAMILY Retrovirus zinc finger-like domains 10 42 IPR036875 GO:0003676|GO:0008270
Lal16g1433 227 MobiDBLite consensus disorder prediction 57 104 - -
Lal16g1433 227 Gene3D - 15 42 - -
Lal16g1433 227 PANTHER DOF ZINC FINGER PROTEIN DOF3.4 71 198 - -
Lal16g1433 227 ProSiteProfiles Zinc finger CCHC-type profile. 21 36 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1433 Lal-Chr16 11123090 11129035 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1433 72 195 C2C2-Dof Transcription Factor Family AT5G66940 29.932 1.58e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1433 - - gmx:778099 102.834