Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1003 ATGACCATGTACATGAAGAATAATAAGCAGAAAGAACCTTCCCCTACTTCATCATCACCACCCTCATATCTCAGGTTCTTCACTGCTCCACAATACCATCTATTTAACTTGTTCTCTCATGTTCTAATCTTTGGTTTTGGTTTACTCATTGGAATCACTCTCACTTTATTTCTCAAAAACTTTTCCTTCAACTTTCAAATCCAACAAGTCTTCACCCCATCTTTCTCTCCTTCTTTCATTTCAATATCCAATATCAGAACATCAAATAATGACACAAAAGTTGTTACCTTAACAAGAGATAGGTTTAGAGGTTTTTTGAAACCAGACATGGCTATGCATAATGTGAGTGATGAAGGGTTATTGTGGAGAGCTTCAATGGTTCCTAAGATTAAGGAAATCCCATCCGAATATCACACTCCAAAGGTTGCATTTATGTTCTTGACTAAAGGGCCTGTGCTTTTGGCTCCTCTATGGGAGAAATTCTTCAAAGGAAATGAAGGGTTGTTTTCTATCTATGTCCATTCTAGTCCTTATTTCAACGGAACAGTGCCTCAAAGTTCTGTGTTTCATGGCCGCAAAATCCCAAGCAAGGAGGTAAGGTGGGGTGACTTCAACATGATAGGAGCAGAAAGGCGTCTACTAGCAAATTCACTACTTGACTTATCCAATCAAAGATTTGTTCTACTCTCAGAATCATGCATTCCTTTGTTCAATTTCTCAACCATCTACAACTATCTTATGAACTCAACCAAAACCTTCATTGAAGCCTATGATTTTCCTGGCCAAGTGGGTCGTGGTAGATACAACCCAAAAATGAAACCATTTATAAAGCTTTCTCAATGGAGAAAAGGTTCTCAATGGTTTCAAATTGATCGTGCCCTAGCCATTGAAATAGTTTCTGATCAAATATATTACCCAGTGTTCAAGAAGTATTGTAGGAATGGATGTTATGGTGATGAACATTATTTGCCAACTTTGGTTAGTATCAAATTTTGGGAGAGGAATTCAAATAGAACATTGACTTGGGTTGATTGGTCAAAGGGTGGACCTCATCCATCAAGGTATATGAGAATGAATGTGACTATTGGTTTTTTGAAGAAGCTAAGACATGGAAGTACGTGTAAATACAATGGGGAAATCACTAATATTTGTCATTTGTTTGCAAGAAAGTTCATGCCTCATGCTTTAGATAGGTTGCTTAGATTTGCTCCAAAGATAATGCAATTCAATTGA 1233 0.3723 MTMYMKNNKQKEPSPTSSSPPSYLRFFTAPQYHLFNLFSHVLIFGFGLLIGITLTLFLKNFSFNFQIQQVFTPSFSPSFISISNIRTSNNDTKVVTLTRDRFRGFLKPDMAMHNVSDEGLLWRASMVPKIKEIPSEYHTPKVAFMFLTKGPVLLAPLWEKFFKGNEGLFSIYVHSSPYFNGTVPQSSVFHGRKIPSKEVRWGDFNMIGAERRLLANSLLDLSNQRFVLLSESCIPLFNFSTIYNYLMNSTKTFIEAYDFPGQVGRGRYNPKMKPFIKLSQWRKGSQWFQIDRALAIEIVSDQIYYPVFKKYCRNGCYGDEHYLPTLVSIKFWERNSNRTLTWVDWSKGGPHPSRYMRMNVTIGFLKKLRHGSTCKYNGEITNICHLFARKFMPHALDRLLRFAPKIMQFN 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1003 410 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 19 409 IPR044174 GO:0016757
Lal16g1003 410 MobiDBLite consensus disorder prediction 1 20 - -
Lal16g1003 410 PANTHER CORE-2/I-BRANCHING ENZYME 19 409 - -
Lal16g1003 410 Pfam Core-2/I-Branching enzyme 142 368 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1003 Lal-Chr16 6657327 6661856 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1003 16 6657327 6661856 Lal16g1003 16 6657327 6661856 ECH
Lal16g1003 16 6657327 6661856 Lal8g0437 8 2936695 2941188 PCT
Lal16g1003 16 6657327 6661856 Lal25g0462 25 3171017 3174986 PCT
Lal16g1003 16 6657327 6661856 Lal10g0972 10 17003005 17006546 PCT
Lal8g0437 8 2936695 2941188 Lal16g1003 16 6657327 6661856 PCT
Lal25g0462 25 3171017 3174986 Lal16g1003 16 6657327 6661856 PCT
Lal10g0972 10 17003005 17006546 Lal16g1003 16 6657327 6661856 PCT