Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0811 ATGGCTGCTCTACCCTTCTCAGCAACCTCTAGGCATGCCAACTCACCTTTACATTACGATTCCAAGTTAAGCATTACAGGTTTCAGTCCAAGAAACAGTATTTGCCAGCTTTTTTTCATCAGAAAATCAAACTCCAGAAGGACACTAAGAAATCTGGTTGTTAAGAATGTTGCCAGTGACAAAAGGCAGGAACTGAATGAACCACTGTCTGAACAAGGCACTTTGGATAATTTTGTACCAGATTCTGCATCAATTGCTTCTAGCATCAAATATCATGCTGAGTTCAAGACATCCTTTTCTCCTGAGAAGTTTGAGCTCGGTAAGGCATACCTTGCAACAGCACAAAGTGTCTTTGATTCACTCATCATAAATTGGAATGCAACATATGACTATTATGAGAAGATTAATGTTAAGCAAGCTTATTATATGTCTATGGAGTATCTACAGGGCAGGGCATTGCTAAATGCAATTGGTAATTTACAACTCTCGGGTCCTTATGCTGAGGCTCTCAGAAAGCTGGGTCAAAATTTAGAGGATGTAGCTAATCAGGAACCAGATGCTGCACTTGGGAATGGTGGATTAGGTAGACTTGCTTCTTGTTTTCTGGACTCATTGGCAACACTTAATTACCCTGCATGGGGATATGGACTTAGATACAAGTATGGTTTATTCAAACAGCTTATAACAAAGAATGGTCAGGAGGAAGCAGCTGAAAGCTGGCTTGAGATGGGAAATCCGTGGGAAATTCTGAGAAATGATGTCTCTTATCCAGTTAAGTTCTATGGAGAAGTTATTTCAGAGCCAAATGGAACTAAACAGTGGATTGGAGGAGAAAATATATCAGCTGTTGCTTATGATGTTCCAATACCTGGATACAAAACTAGAACAACTATTAACCTGCGGTTATGGTCCACTAAAGTTTCACCAGCAGAATTTGATTTGCAAGCTTTCAATACAGGAGATCATGCCAAAGCATATGCTACCATGAAAAATGCAGAGAAAATTTGCTATGTGTTGTACCCTGGAGATGAATCCTTAGAAGGAAAGATACTGCGATTGAAACAACAATATACATTATGCTCTGCATCTCTCCAGGATATTTTTGCACGCTTTCTAAAGAGATCAGGAAATATAGTAAACTGGGACACTTTCCCAGAAAAAGTGGTGATCCAAATGAATGATACTCACCCAACACTCTGCATTCCTGAACTGATTAGGATATTGATGGATGTAAAGGGTTTAAGCTGGGAAAAAGCTTGGGATATTACCAAAAGTGGAATTGAGGAAAATGGAAAGCTTCAGAGCTATGAAATACACTTGTTAGATAGCTCTGAATCCTTCAGTTTCCATTTCTTCACATCCAAAACTCAACTCGCAAACAGAACATTCGAGAACACGACTTTGGGAGGATACAATGATGTTACTTTCCTATTTAACTTCTTTGATCTTTATACACAGTCTGATTCCTCTTTCAATGGCTCTTCTGTTAGAACGGTTGCTTACACAAACCACACAGTTCTGCCAGAAGCCCTAGAGAAATGGAGTTTGACACTTCTGCAGAATTTGCTACCTAGACATGTGGAGATAATAAGAAGAATAGAAGAAGAGTTCATACATGAAATTATTTCCAAGTATGGGACAGATGATCTTGACTTGTTACAACAAAAGCTTAGAAAGGTGAGAATACTAGAAAATATTGAGTTACCCAACTCAGTGATAGAGATGCTTAATAATTTAAAGAAGGTTCCTGCCTCTGAGGATGTGAAAGAAATTGGTGTTGATGATAATGATATAAAGGCAACAGAAGAGATAGAAGATGATGACAATTCTGCTGGGGAGGATACTAATAAGAAAACGGAGTGGACATTCAAAGTCGATCCGAATCTGCCAAGGATGGTACGCATGGCTAATCTTTGTATTGTTGGTGGACTTTCTGTGAATGGAGTAGCTAAGATTCATAGTGAGATTGTGAAAGATGAAGTTTTTGATGAATTTTACAAGTTATGGCCAGAGAAATTCCAGAATAAAACAAATGGGGTGACACCTAGAAGATGGATCCGTTTTTGTAATCCTGATCTTAGTAACATCATAACCAAGTGGATTGGAACAGATGATTGGGTAACAGATCTTGAGAAATTGGCTTTACTTCGCAAGTTTGCAGATAATGAGGATCTACAATTGGAGTGGACAGAGTCCAAAAAAAGAAACAAGATTAAGGTTGCATCATTTCTCAAAGACAAAACTGGTTATGTTGTCAATCCAAATGCAATGTTTGATGTACAGGTGAAGCGAATTCATGAATATAAGCGGCAATTACTGAACATCTTGGGAATTGTTTATCGGTACAAAAAGATGAAAGAATTGAGCGCCGAAGAAAGAAAACAAAAGTTTGTTCCTCGGGTTTGTATTTTCGGGGGGAAAGCATTTGCAACATATGTTCAAGCCAAGAGGATAGTAAAATTCATCACAGATGTAGGAGCTACAGTCAATCATGATCAAGAGATTGGAGATCTTTTGAAGGTTGTATTTGTCCCTGATTACAATGTCAGTGTTGCTGAAGTGCTGATTCCTGGCAGTGAGTTGTCCCAGCACATCAGCACTGCTGGAATGGAGGCTAGTGGAACAAGCAACATGAAATTTGCAATGAATGGATGTGTACTTATAGGAACTCTTGATGGTGCTAATGTTGAAATAAGAGAAGAGGTTGGAGAAGATAACTTCTTTCTTTTCGGCGCACGAGCTAACGAGATCGCTGGGCTGCGGGAAGAAAGAGCTCAGGGAAAGTTTGTATCAGACCCAAGGTTTGAAGAAGTGAAGACATATGTTAGAAGTGGTGTTTTTGGGCCCTACAACTATGAAGAATTGATGGGGTCATTGGAAGGGAATGAAGGGTATGGTCGTGCTGATTATTTCCTTGTTGGCAAGGACTTCCCTAACTACTTGGAATCCCAAGAAGCAGTTGATCAGGCATATCTTGATCAAAAGAGATGGACAAGAATGTCAATTTTGAATACAGCTGGTTCGTACAAATTCAGTAGTGACCGGACTATTCATGAATATGCTAGAGACATATGGAAAATTGAACCTGTTGTCTTGCCTTGA 3102 0.3917 MAALPFSATSRHANSPLHYDSKLSITGFSPRNSICQLFFIRKSNSRRTLRNLVVKNVASDKRQELNEPLSEQGTLDNFVPDSASIASSIKYHAEFKTSFSPEKFELGKAYLATAQSVFDSLIINWNATYDYYEKINVKQAYYMSMEYLQGRALLNAIGNLQLSGPYAEALRKLGQNLEDVANQEPDAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYKYGLFKQLITKNGQEEAAESWLEMGNPWEILRNDVSYPVKFYGEVISEPNGTKQWIGGENISAVAYDVPIPGYKTRTTINLRLWSTKVSPAEFDLQAFNTGDHAKAYATMKNAEKICYVLYPGDESLEGKILRLKQQYTLCSASLQDIFARFLKRSGNIVNWDTFPEKVVIQMNDTHPTLCIPELIRILMDVKGLSWEKAWDITKSGIEENGKLQSYEIHLLDSSESFSFHFFTSKTQLANRTFENTTLGGYNDVTFLFNFFDLYTQSDSSFNGSSVRTVAYTNHTVLPEALEKWSLTLLQNLLPRHVEIIRRIEEEFIHEIISKYGTDDLDLLQQKLRKVRILENIELPNSVIEMLNNLKKVPASEDVKEIGVDDNDIKATEEIEDDDNSAGEDTNKKTEWTFKVDPNLPRMVRMANLCIVGGLSVNGVAKIHSEIVKDEVFDEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSNIITKWIGTDDWVTDLEKLALLRKFADNEDLQLEWTESKKRNKIKVASFLKDKTGYVVNPNAMFDVQVKRIHEYKRQLLNILGIVYRYKKMKELSAEERKQKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDQEIGDLLKVVFVPDYNVSVAEVLIPGSELSQHISTAGMEASGTSNMKFAMNGCVLIGTLDGANVEIREEVGEDNFFLFGARANEIAGLREERAQGKFVSDPRFEEVKTYVRSGVFGPYNYEELMGSLEGNEGYGRADYFLVGKDFPNYLESQEAVDQAYLDQKRWTRMSILNTAGSYKFSSDRTIHEYARDIWKIEPVVLP 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0811 1033 CDD GT35_Glycogen_Phosphorylase 88 1027 - -
Lal16g0811 1033 Gene3D Glycogen Phosphorylase B; 489 682 - -
Lal16g0811 1033 PANTHER GLYCOGEN PHOSPHORYLASE 25 426 IPR000811 GO:0005975|GO:0008184
Lal16g0811 1033 PANTHER GLYCOGEN PHOSPHORYLASE 496 1033 IPR000811 GO:0005975|GO:0008184
Lal16g0811 1033 TIGRFAM P_ylase: glycogen/starch/alpha-glucan phosphorylases 616 1027 IPR011833 GO:0004645|GO:0005975|GO:0030170
Lal16g0811 1033 Pfam Carbohydrate phosphorylase 496 1027 IPR000811 GO:0005975|GO:0008184
Lal16g0811 1033 Pfam Carbohydrate phosphorylase 170 425 IPR000811 GO:0005975|GO:0008184
Lal16g0811 1033 Gene3D Glycogen Phosphorylase B; 683 1012 - -
Lal16g0811 1033 PIRSF Glucan_phosphorylase_GlgP 81 428 IPR000811 GO:0005975|GO:0008184
Lal16g0811 1033 PIRSF Glucan_phosphorylase_GlgP 493 1033 IPR000811 GO:0005975|GO:0008184
Lal16g0811 1033 PANTHER ALPHA-1,4 GLUCAN PHOSPHORYLASE L-2 ISOZYME, CHLOROPLASTIC/AMYLOPLASTIC 496 1033 - -
Lal16g0811 1033 PANTHER ALPHA-1,4 GLUCAN PHOSPHORYLASE L-2 ISOZYME, CHLOROPLASTIC/AMYLOPLASTIC 25 426 - -
Lal16g0811 1033 Gene3D Glycogen Phosphorylase B; 80 435 - -
Lal16g0811 1033 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 495 1030 - -
Lal16g0811 1033 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 81 425 - -
Lal16g0811 1033 ProSitePatterns Phosphorylase pyridoxal-phosphate attachment site. 871 883 IPR035090 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0811 Lal-Chr16 5244765 5252159 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0811 16 5244765 5252159 Lal16g0811 16 5244765 5252159 ECH