Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal16g0803 | ATGGCTCTTATAATTTACTTTGTGCTTTTCATGGCTCTATGTATAAGGCATTCTAGTGCAAGTTACTGTTTATGCAAAGATGGAGTTGACAGTGATGAGCTTCAGAAAGCATTAGACTATGCATGTGGATTTGGAGCTGATTGTGGTCCAATTCAACCAAATGGACCTTGTTTTGAACCCAACACAGTGAAAGATCACTGTGACTATGCTGTTAATAGCTATTACCAAAATATGCATCTTGTTGGAGGAACATGTGATTTTGCTGGCGCCGCCACAACTAGTCCAACTCTACCTGCTCAAATTTCTTGCGGATGTGTTTACGCCCCAGGTCCTGGGTACGCTAATGTTTTATTTATCTATTTTGGGTCTTCTTGCAGTGACTCAGGAACAAACCCTAAACCACCATCAGTTGAAACACCAACAACACCACCATCAGTTGAAACACCAACAACACCAAGTACAAGAACTCCAGGCACACCCTCTTTGGCCCCACCAACCGGTACAGATGGCACAATACCAGATGTGTTTGGAACAACTACACCTAAAGATAGAAATGATAGTTCCAACGTTAAAGGCATCAACACCAAGTTATTATTGCTCCTCATTCTTGCTATCTCCTGGATAGCATTGAGGGCCTAA | 639 | 0.4225 | MALIIYFVLFMALCIRHSSASYCLCKDGVDSDELQKALDYACGFGADCGPIQPNGPCFEPNTVKDHCDYAVNSYYQNMHLVGGTCDFAGAATTSPTLPAQISCGCVYAPGPGYANVLFIYFGSSCSDSGTNPKPPSVETPTTPPSVETPTTPSTRTPGTPSLAPPTGTDGTIPDVFGTTTPKDRNDSSNVKGINTKLLLLLILAISWIALRA | 212 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal16g0803 | 212 | MobiDBLite | consensus disorder prediction | 130 | 189 | - | - | |
| Lal16g0803 | 212 | PANTHER | BETA-1,3 GLUCANASE | 1 | 200 | IPR044788 | - | |
| Lal16g0803 | 212 | SMART | X8_cls | 21 | 107 | IPR012946 | - | |
| Lal16g0803 | 212 | Gene3D | - | 12 | 108 | - | - | |
| Lal16g0803 | 212 | MobiDBLite | consensus disorder prediction | 148 | 189 | - | - | |
| Lal16g0803 | 212 | Pfam | X8 domain | 22 | 92 | IPR012946 | - | |
| Lal16g0803 | 212 | PANTHER | PLASMODESMATA CALLOSE-BINDING PROTEIN 4 | 1 | 200 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal16g0803 | Lal-Chr16 | 5197805 | 5198999 | Tandem |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lal16g0803 | 16 | 5197805 | 5198999 | Lal15g0773 | 15 | 5530488 | 5531900 | LSH | |
| Lal16g0803 | 16 | 5197805 | 5198999 | Lal23g0828 | 23 | 10734683 | 10736211 | LSH | |
| Lal16g0803 | 16 | 5197805 | 5198999 | Lal6g0797 | 6 | 5356527 | 5358825 | PCT | |
| Lal16g0803 | 16 | 5197805 | 5198999 | Lal18g0916 | 18 | 11970065 | 11972127 | PCT | |
| Lal6g0797 | 6 | 5356527 | 5358825 | Lal16g0803 | 16 | 5197805 | 5198999 | PCT | |
| Lal18g0916 | 18 | 11970065 | 11972127 | Lal16g0803 | 16 | 5197805 | 5198999 | PCT |