Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0768 ATGCATAATAGTTGCAGTACCATGCAATCACATTTTGTAGATATAACCACGGAAGTGCCGGAAGCGCACCCGGTTGCTCCACCACCCAAACAGACCACCCTACAGAGGCTTAAAATTTGGATCAAGGAAACCTTTTTCTCTGATGATCCTCTGCGCCAATTCAGGGGACAACCACTTCAGAGAAAACTAATACTTGGAGCTCAATATGTGTTCCCTGTTCTTGAATGGGCCCCAAAATACAACCTCAAACTCTTGAAATCTGATCTTATTTCTGGTATCACCATTGCTAGTTTGGCAATCCCTCAGGGAATCAGTTATGCTAAGCTTGCAAATCTTCCTCCAATTTTGGGACTTTTTGTTCCGCCACTTGTGTATGTTGTTCTTGGAAGCTCAAAGGATCTTGGAGTAGGACCTGTTTCTATTGCCTCTCTTGTAATGGGATCCATGCTCCAAGATGAAGTGTCTCCCATTGAAGATCCTGATCTGTTTCTTAAGCTAGCTTTAACTTCAACATTTTTTGCTGGTCTCTTTCAAGCTGCTCTTGGAATTCTGAGGCTAGGATTTATCATTGATTTTCTATCTAAGGCCATTCTTCTTGGTTTCATGGCTGGATCAGCTGTAATTGTCTCTTTGCAACAGCTCAAGGGCCTCCTTGGAATCAAACATTTCACTAAAAAGATGGCCATCATTCCTGTTATGAAATCTGTTTTTCATAAAACCGATGAGTGGTCATGGCAAACAATAGTGATGGGGATTTCCTTCTTGATAATACTACTAGTAGCAAGACACGTGAGCATAAAGAAACCAAAACTTTTTTGGGTCTCAGCTGGAGCCCCTCTTATGTGTGTTATCATCTCTACCATCCTAGCTTTTGCTATTAAGGCTCAACATCATGGCATCAGCATAATTGGAAAGTTGCCAAAAGGAATAAATCCTCCGTCAACTGATAAGTTGATATTTAATGGAAGTCATCTAAGTCTGGTCATTAAAACTGGATTTATCACTGGCATTTTATCCCTCACTGAGGGAATTGCAGTAGGAAGAACATTTGCAGCTCTCAGAAACTACAAAGTTGATGGAAATAAGGAAATGATGGCAATTGGGCTAATGAATGTGGTTGGCTGCACCACATCATGCTATATTACAACAGGATCATTCTCTCGCTCAGCTGTGAATAATAGCGCAGGAGCAAAAACAGCCATGTCTAACGTTATAATGTCTTTGGCAGTCCTGGTGACACTCCTATTTCTCATGCCATTATTTCACTACACGCCAAACGTTATATTGGGTGCAATCATAATAACAGCAGTAATTGGGCTCATTGATATCCCTGCTGCTTATCTCCTCTGGAAGATAGACAAATTCGATTTCCTTGTCATGTTGGTTGCATTCTTTGGTGTTATTTTTATCTCAGTTCAGTACGGCCTTGCTATGGCAGTCGGGTTATCAATTTTGAAGGTCCTCCTGCAAATTACAAGGCCTAAAACAGTAATGTTGGGGAAAATACCAGGGACAGACATATATAGAGATCTTCATCATTACAAGGAAGCTGCAAGAGTACCTGGTTTTCTTATTTTAAGAATAGAGGCCCCAATCAATTTTGCAAACATAACATATCTCCATGAGAGGATAATACGATGGACAGAAGAAGTTGAAGAAAATAATTTAATGACAGACTTTAGCCTTCAGTTTGTGGTTCTGGAAATGTCAGCTGTTAGCACAGTAGACTCAAGTGGAGTCTCACTTTTCAAGGACTTGAATACAGCATTGGGACATAAGGGTCTTGCATTGGTGAATCCTCTAGCTGAAGTCTTAGTGAAGCTGAAAAAAGCCGATGAAGGTCATAATAAGATTCGAGAAGATTATCTTTTCGTGACAGTTGGAGAGGCTGTAGCTTCACTTTCATCAACAATGAAGAGACCAACAGTGGGAGAAGAGGTACAGGAAACTGTGGTTGAATACTAA 1965 0.4061 MHNSCSTMQSHFVDITTEVPEAHPVAPPPKQTTLQRLKIWIKETFFSDDPLRQFRGQPLQRKLILGAQYVFPVLEWAPKYNLKLLKSDLISGITIASLAIPQGISYAKLANLPPILGLFVPPLVYVVLGSSKDLGVGPVSIASLVMGSMLQDEVSPIEDPDLFLKLALTSTFFAGLFQAALGILRLGFIIDFLSKAILLGFMAGSAVIVSLQQLKGLLGIKHFTKKMAIIPVMKSVFHKTDEWSWQTIVMGISFLIILLVARHVSIKKPKLFWVSAGAPLMCVIISTILAFAIKAQHHGISIIGKLPKGINPPSTDKLIFNGSHLSLVIKTGFITGILSLTEGIAVGRTFAALRNYKVDGNKEMMAIGLMNVVGCTTSCYITTGSFSRSAVNNSAGAKTAMSNVIMSLAVLVTLLFLMPLFHYTPNVILGAIIITAVIGLIDIPAAYLLWKIDKFDFLVMLVAFFGVIFISVQYGLAMAVGLSILKVLLQITRPKTVMLGKIPGTDIYRDLHHYKEAARVPGFLILRIEAPINFANITYLHERIIRWTEEVEENNLMTDFSLQFVVLEMSAVSTVDSSGVSLFKDLNTALGHKGLALVNPLAEVLVKLKKADEGHNKIREDYLFVTVGEAVASLSSTMKRPTVGEEVQETVVEY 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0768 654 PANTHER BNAA09G30120D PROTEIN 21 636 IPR030313 -
Lal16g0768 654 Pfam Sulfate permease family 85 462 IPR011547 GO:0016021
Lal16g0768 654 ProSiteProfiles STAS domain profile. 513 634 IPR002645 -
Lal16g0768 654 PANTHER SULFATE TRANSPORTER 3.3-RELATED 21 639 IPR030313 -
Lal16g0768 654 TIGRFAM sulP: sulfate permease 72 630 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal16g0768 654 CDD STAS_SulP_like_sulfate_transporter 514 627 - -
Lal16g0768 654 PANTHER SULFATE TRANSPORTER 21 636 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal16g0768 654 PANTHER SULFATE TRANSPORTER 21 639 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal16g0768 654 Pfam STAS domain 514 630 IPR002645 -
Lal16g0768 654 SUPERFAMILY SpoIIaa-like 519 633 IPR036513 -
Lal16g0768 654 Gene3D STAS domain 493 637 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0768 Lal-Chr16 4971393 4977413 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0768 19 639 Inorganic Solute Cotransporters AT3G15990 63.880 0.0 803
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0768 16 4971393 4977413 Lal16g0768 16 4971393 4977413 ECH
Lal16g0768 16 4971393 4977413 Lal23g0868 23 10992240 11001104 LSH