Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0767 ATGGACCCTCCCAATTTAAAGAAATACGGTATTCCTATCTACTCCGTTGCTTGGATCCCACAAAACCTCGTCAAATCGCGCCAAAACGTAACCGCCGATGATTCTTCCTCCGATGCCGATCAAAACTCTCCCCCGGATACGAAGCCGGAGGAGAACGATTTGATGGAGGGAGTGACCGCCGGGAATTACCTAGTCTTTTCCGGCGGTGGTGGAGAAGGACATAGCGGCATTCCTAATTCTCTGTTGATCGCGCACTTTGATGTTGCATCGAATTCTCTTTCTGATCAACCGGTGGGTAGGCTAGGAACTAATTCTCACTTGCCTTACAGAATGGCAATTCACCCTAATGGAGATGGCCTTATTTGTTCAATGATGTCAAAGAGTTGCAGATGGTTTGACTGGGACCAAAACAAGGGTTCTGAAAACCATAAGTTAGTTCCGAAGAAGTCAGAGATAGTCCTTACTGGGTTGGAAGATGTTGAACTGCAATTAGCATTGGCATTCAACAATGTTGGTACTGCACTAGCTGCTGGTGGAGAGGATGGCAATCTAAGGGTTTTCAAGTGGCCTAGTATGGAAATTATTCTCAACGAGTCTAATGCTCATTCTACTGTGAAGGACTTACATTTTAGTTCTGATGATAAACTACTTGTCTCTGTGGGAGGTGCTGGCCCCAGCAGGGTTTGGGATGTTTCTTCATCAAAACTCTTGACTACTCTATCAAATGAAAATCGCGATACTTTTAGCTCTTGCAGATTTTCTCAAATAAATGATAGGACTCAGGTCCTATTTATCGCTGATAATGGTGGAAGCATTCTGACCTGGAATACGCAAACATGGAAAAGAATAAACTCAAAGCGTATTATTCGTGATGCAATCTCTGCGTTGAATGTCTCGGCTGATGGAAAGTTTCTTGCATGTGGAACACCTTCTGGGGACATCGTAATTGTAAGTTCAAAAAATATGCAGATTCAGACAATGATAAAAAAGGCTCACCTTGGCATAGTAACTGCTTTAGCGTTCTCCCATGATTCAAGGGCCTTGGCTTCTGTATCCATGGATTCAAGTGCGAGGATAACACTAATTGAGGAGAAGAAAAATGTGATGGATAATGCTGCTGCTACGGACCCTTCGCCACTTTCCCTTAACGAAGATTCTAGAAGCACCATGAATTACCTGAAACACACTCTCTTGTCTCGTCTTCTCGAATCTACTCCTTCCCTTTGTATCAACACCGATCATGTCTCCTCTTATATTCAACAGCGTCTTCCGCACCTTTTTCCTTCATTCACCATCCCCTCTCACCTCCCTTATGCTCTGATGATAGAAAATGCAATAAAGGGGCTGGGTGAGAGAAATGGATCAACTGAGGAGGCCATATCTGGTTTCATTAAAGAGGAATATAATGATTTGCCTTTGGCCCATACGAGGATTCTGCATGTTCAATTGAAAATGCTTTGTGAGAATGGGGAGCTTGTGTGTAAGGAGGGTGGGAGGTATGTGTTTGTGGTCGATGATGTAGATGTTTGTATTGATGGAATGAGTGATGAGGATGGGAAAGGGGCAGAATTGAAGGGTGGCAATAAGGGGAAGAGAGGGGGAAATAAGAACAGTGATGGAAAGGAGGAAAAGCGAGTATCTGGGTTACGTGATGCTATGACCGACGATGAACTTAGTAAGGCGGTGGTTGAATCCGTACAACAACAGGTGGAAGCAGAAGAGGATACTTTAATTAGGGAAATGGTTGAGGTACAGGGACAATCTGAAAAGGGAATGAGTGGTGATGGTAACGGGACAAATGGTAAGTGTATCAAGAAGAGGAAGAGAAGGAAAAAGAGATATACTGATGGAAAGAGGGAGAAAAGAGGGAGAACGAAAAGGGGTTATCGTGTTGAGAAAGATAACGAGCTGCAAGAGGCAGGAGTTAAGGAACAAAGGCAAGTGTCAGAGTTGCCTGATGCTAAGGCTGATCAACCAGGCAGGGTGTTGGAAGAATGCACGCAAGAACAGCTGGAAGAAGAAGAGATTCTTTTACTTGAAAACGCTGAAGAGCATAGACAAGAGATTCTTTCACAAATTCAGCAGGGTTCCGTACTGCATTTGGAAACAATTTGTTCATCCCAACAGCCATTGCCACTTTCTATTTCCGAAGGGTTTTCAAAGGGTATATCAGCAGGGATAGAGCACGATAATAACCCATTGTCAGGTGATCCTGAGCTGAAACCATTTAAGAGTCCCAAAAGAACACCTTGTAAACCAGAGCTTGCTGCTTACCAAAGTAAGAGGCTGTTACAAGCAGTAGATCAAGCTCATCAGTGTGGTCCAGGTAGAGGCAGAGGTAGGGGTAGAGGTAGGGGAAGAGGTAGAGGTCAGCAGAGGCCTACTAAACAAAGTCATGATAAAGACCAATGTGAAGATCAGTTACAGCAAGGGGTTCGAGAAGCAGAAGCTCAAGCACAAAGTGAAGGGGAAAAGTCACAAGGTTCACAAATTCAGAAGCCATTGCTGGTTCCTATGTTGGAAGGGTTGCCAATGGGCATACCGTCAGCTGGGATAGAGCAAGATGAGAACCCATTGTCAGGTGATCCTGAGAAGAAAACACTGAAGCGTCCCCGAGGAAGACCTTGTAAATCACTTATAACTCCTTACCAACGTAGGAAACTGTTAAAAACACGAGATCAAACTCAGAATTGTGGTCAAGGTAGAGGTAGTGATAGTGGCAGGGGTCGGGGGAGGCCTCCTAAAGTAAGTCACAATACAGACCAATGTAAAGAGCAGTTACAACAAGAGGATCGCGCTCAGCATGGTAGAGGGAGAGGGAGAGGGAGAGGCAGAGGCAGAGGCAGAGGCAGAGGGAGAGGGAGGGCTCTTACTCTTGACCAGAATGCCAACCAATATGAGGAGTTCTTACAACAAGAGGATCGAGCTCAGCAGCATGGTAGTGGTAAAGGTGGAACAAGTGGCGAAGATCAAGGGGAGCCTCATGAACTTGATCGAAATGCAAATCAATCTGAGGAGCAGTTACCACCACAAGATGAAGCTCCAAGTTTGCTGGAGTTGGCACCACATGTTGAACAAACATATGAAATCCTGTCTATGGAGAATGCCCTTAATTCATTATCAGATGCAAACCAGACCCTCCAGCAACTACGGCCAGAGCCGCGGAATGAAGATCTTGGTCAGGATATGCCCCCTCCTAATCCAATGTTGGATGCAAACCAAGGCAATCAGCTGCAACAGCCACAAGACCCACAAGAAAGTGAAGATCAACCAATAGTCAGGGCAAGCCACCTATAA 3297 0.4513 MDPPNLKKYGIPIYSVAWIPQNLVKSRQNVTADDSSSDADQNSPPDTKPEENDLMEGVTAGNYLVFSGGGGEGHSGIPNSLLIAHFDVASNSLSDQPVGRLGTNSHLPYRMAIHPNGDGLICSMMSKSCRWFDWDQNKGSENHKLVPKKSEIVLTGLEDVELQLALAFNNVGTALAAGGEDGNLRVFKWPSMEIILNESNAHSTVKDLHFSSDDKLLVSVGGAGPSRVWDVSSSKLLTTLSNENRDTFSSCRFSQINDRTQVLFIADNGGSILTWNTQTWKRINSKRIIRDAISALNVSADGKFLACGTPSGDIVIVSSKNMQIQTMIKKAHLGIVTALAFSHDSRALASVSMDSSARITLIEEKKNVMDNAAATDPSPLSLNEDSRSTMNYLKHTLLSRLLESTPSLCINTDHVSSYIQQRLPHLFPSFTIPSHLPYALMIENAIKGLGERNGSTEEAISGFIKEEYNDLPLAHTRILHVQLKMLCENGELVCKEGGRYVFVVDDVDVCIDGMSDEDGKGAELKGGNKGKRGGNKNSDGKEEKRVSGLRDAMTDDELSKAVVESVQQQVEAEEDTLIREMVEVQGQSEKGMSGDGNGTNGKCIKKRKRRKKRYTDGKREKRGRTKRGYRVEKDNELQEAGVKEQRQVSELPDAKADQPGRVLEECTQEQLEEEEILLLENAEEHRQEILSQIQQGSVLHLETICSSQQPLPLSISEGFSKGISAGIEHDNNPLSGDPELKPFKSPKRTPCKPELAAYQSKRLLQAVDQAHQCGPGRGRGRGRGRGRGRGQQRPTKQSHDKDQCEDQLQQGVREAEAQAQSEGEKSQGSQIQKPLLVPMLEGLPMGIPSAGIEQDENPLSGDPEKKTLKRPRGRPCKSLITPYQRRKLLKTRDQTQNCGQGRGSDSGRGRGRPPKVSHNTDQCKEQLQQEDRAQHGRGRGRGRGRGRGRGRGRGRALTLDQNANQYEEFLQQEDRAQQHGSGKGGTSGEDQGEPHELDRNANQSEEQLPPQDEAPSLLELAPHVEQTYEILSMENALNSLSDANQTLQQLRPEPRNEDLGQDMPPPNPMLDANQGNQLQQPQDPQESEDQPIVRASHL 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0767 1098 MobiDBLite consensus disorder prediction 28 54 - -
Lal16g0767 1098 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 434 504 IPR005818 GO:0000786|GO:0003677|GO:0006334
Lal16g0767 1098 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 60 359 IPR011047 -
Lal16g0767 1098 MobiDBLite consensus disorder prediction 1070 1089 - -
Lal16g0767 1098 SMART WD40_4 233 276 IPR001680 GO:0005515
Lal16g0767 1098 SMART WD40_4 279 318 IPR001680 GO:0005515
Lal16g0767 1098 SMART WD40_4 192 230 IPR001680 GO:0005515
Lal16g0767 1098 SMART WD40_4 147 188 IPR001680 GO:0005515
Lal16g0767 1098 SMART WD40_4 320 361 IPR001680 GO:0005515
Lal16g0767 1098 SMART WD40_4 94 133 IPR001680 GO:0005515
Lal16g0767 1098 ProSiteProfiles Trp-Asp (WD) repeats profile. 198 239 IPR001680 GO:0005515
Lal16g0767 1098 MobiDBLite consensus disorder prediction 908 937 - -
Lal16g0767 1098 Coils Coil 1030 1050 - -
Lal16g0767 1098 Coils Coil 668 688 - -
Lal16g0767 1098 MobiDBLite consensus disorder prediction 28 43 - -
Lal16g0767 1098 MobiDBLite consensus disorder prediction 813 833 - -
Lal16g0767 1098 PANTHER PROLACTIN REGULATORY ELEMENT BINDING PROTEIN 3 366 IPR045260 GO:0005085
Lal16g0767 1098 Gene3D - 431 504 IPR036388 -
Lal16g0767 1098 PRINTS AT-hook-like domain signature 788 798 IPR017956 GO:0003677
Lal16g0767 1098 PRINTS AT-hook-like domain signature 867 878 IPR017956 GO:0003677
Lal16g0767 1098 PRINTS AT-hook-like domain signature 905 915 IPR017956 GO:0003677
Lal16g0767 1098 MobiDBLite consensus disorder prediction 724 751 - -
Lal16g0767 1098 MobiDBLite consensus disorder prediction 1039 1098 - -
Lal16g0767 1098 MobiDBLite consensus disorder prediction 938 952 - -
Lal16g0767 1098 MobiDBLite consensus disorder prediction 518 566 - -
Lal16g0767 1098 MobiDBLite consensus disorder prediction 770 1021 - -
Lal16g0767 1098 MobiDBLite consensus disorder prediction 627 660 - -
Lal16g0767 1098 MobiDBLite consensus disorder prediction 586 660 - -
Lal16g0767 1098 MobiDBLite consensus disorder prediction 603 626 - -
Lal16g0767 1098 CDD H15 433 493 IPR005818 GO:0000786|GO:0003677|GO:0006334
Lal16g0767 1098 Gene3D - 56 368 IPR015943 GO:0005515
Lal16g0767 1098 Pfam linker histone H1 and H5 family 435 496 IPR005818 GO:0000786|GO:0003677|GO:0006334
Lal16g0767 1098 SMART h15plus2 432 498 IPR005818 GO:0000786|GO:0003677|GO:0006334
Lal16g0767 1098 PANTHER SEC12P-LIKE 2 PROTEIN-RELATED 3 366 - -
Lal16g0767 1098 MobiDBLite consensus disorder prediction 793 809 - -
Lal16g0767 1098 MobiDBLite consensus disorder prediction 958 985 - -
Lal16g0767 1098 MobiDBLite consensus disorder prediction 518 558 - -
Lal16g0767 1098 MobiDBLite consensus disorder prediction 778 792 - -
Lal16g0767 1098 SUPERFAMILY "Winged helix" DNA-binding domain 433 501 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0767 Lal-Chr16 4954372 4970933 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0767 16 4954372 4970933 Lal16g0767 16 4954372 4970933 ECH