Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0766 ATGATCAACACCCTCTTCTTCTGCTTATTCCAATCATCCATTCTCTTATCTTCTTCAAAATCAACCAATCCATTCCCCAAAGAAGCCCTCCCCACAAAATCAGGTTACTTACCAATAAACTCCACTTCAAGTTCCTCCATTTTCTACACATTCTATGAAGCCCAAAACTCCACTTCACCACTTTCTCAAACCCCTCTTCTCATTTGGCTACAAGGTGGCCCTGGATGCTCCTCCATGATTGCCAACTTCTATGAACTTGGACCCTGGCGTGTCACCAAATCCCTCACCCTTCAACGTAACCCTGGTTCCTGGAACAGGAGATTTGGCCTTCTTTTTCTTGATAATCCCATTGGAACTGGTTTCAGTATTGCCTCAACACCACAGGAGATTCCAACAGATCAAAACGGTGTCGCGAAACACCTCTTTGCTGCTATAACAAGGTTTGTTAAGCTTGATCCTGTTTTCAAGTCTAGGCCTATTTATATCACTGGTGAAAGCTATGCTGGGAAATATGTGCCTGCAATAGGGTATTATATATTGAAGAAAAATGAGAAATTGCATGCTTCTAAAAAAGTGAATTTGGCTGGGTTGGCTATTGGTGACGGGTTAACTGATCCTTTGACACAAGTGGCTACTCATGCTGCAAATGCTTACTATCTTGGATTGATTAATGAGAGGCAAAAAAATATATTGGAGAGTACTCAGTTAGAAGCGATTCAATTAACAAAGACGAGGAATTGGAGTGACGCAACTGATGCAAGAAGTAGAGTATTGATTAAGTTGCAAAGCATGACAGGGCTGGCTACTTTGTATGATTATACAAGGAAAGTTCCATATGAAGATGATTTGGTTGCACAATTCTTGAACTTAACCAAGGCTAAGAAGGCCTTGGGGGTGAATGAATCATTTGAGTATGAGGTTTGTAGCGAGGTTGTTGGGGCTGCATTACATGCTGATGTGATGAAGAGTGTGAAACATAAGGTGGAGGAGTTAGTGAAGAGGAGTAGAGTGTTATTGTACCAAGGCCAGTATGATATAAGAGATGGTGTGGTTCAAGTAGAGGCTTGGGTGAAGACAATGAAATGGGAAGGGATTGATGAGTTTCTGAATGCTGAGAGGAAGATTTGGAAAGTGAATGGAGAAGTTGCTGGGTATGTGCAAAAATGGAAGTCTCTTACCAATGTTGTGGTTTTGAGAGCTGGACATCTTTTACCCACTGATCAGCCTGTGAATTCTCAAGCAATGATAGAAGATTGGGTTTTGGAAAGGGGTTTGTTTCAAAGTGTGCAACTTGATAATGTGTCAATAAATTCTACTTTCTCTCATTTGTTGTGA 1335 0.4112 MINTLFFCLFQSSILLSSSKSTNPFPKEALPTKSGYLPINSTSSSSIFYTFYEAQNSTSPLSQTPLLIWLQGGPGCSSMIANFYELGPWRVTKSLTLQRNPGSWNRRFGLLFLDNPIGTGFSIASTPQEIPTDQNGVAKHLFAAITRFVKLDPVFKSRPIYITGESYAGKYVPAIGYYILKKNEKLHASKKVNLAGLAIGDGLTDPLTQVATHAANAYYLGLINERQKNILESTQLEAIQLTKTRNWSDATDARSRVLIKLQSMTGLATLYDYTRKVPYEDDLVAQFLNLTKAKKALGVNESFEYEVCSEVVGAALHADVMKSVKHKVEELVKRSRVLLYQGQYDIRDGVVQVEAWVKTMKWEGIDEFLNAERKIWKVNGEVAGYVQKWKSLTNVVVLRAGHLLPTDQPVNSQAMIEDWVLERGLFQSVQLDNVSINSTFSHLL 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0766 444 Gene3D alpha/beta hydrolase 11 431 IPR029058 -
Lal16g0766 444 PRINTS Carboxypeptidase C serine protease (S10) family signature 100 112 IPR001563 GO:0004185|GO:0006508
Lal16g0766 444 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 123 IPR001563 GO:0004185|GO:0006508
Lal16g0766 444 PRINTS Carboxypeptidase C serine protease (S10) family signature 148 173 IPR001563 GO:0004185|GO:0006508
Lal16g0766 444 PRINTS Carboxypeptidase C serine protease (S10) family signature 392 405 IPR001563 GO:0004185|GO:0006508
Lal16g0766 444 PANTHER CARBOXYPEPTIDASE 11 428 - -
Lal16g0766 444 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 11 428 IPR001563 GO:0004185|GO:0006508
Lal16g0766 444 Pfam Serine carboxypeptidase 30 420 IPR001563 GO:0004185|GO:0006508
Lal16g0766 444 ProSitePatterns Serine carboxypeptidases, serine active site. 162 169 IPR018202 GO:0004185
Lal16g0766 444 SUPERFAMILY alpha/beta-Hydrolases 31 420 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0766 Lal-Chr16 4951665 4953269 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0766 319 420 Calmodulin-binding Proteins AT2G22960 21.569 4.32e-08 51.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0766 16 4951665 4953269 Lal16g0766 16 4951665 4953269 ECH