Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0751 ATGGTTTTATTTAACCAAGCTTCACTTTCAAAATTGAAAACATGCACCATCCTTCTTTGTATTCTCTTAGTAGATTGCCAAATCCTTGAAAGTGCATCACAATCACTCCCATTAGTCCCTGACATTTTAACGTTCATAGACAAAAGGCTCGCTTTAGTATTCCCGATTATTCAAAACTTCAAGAAAACAATAACCTCAGACCCATTTGGAGTGACCACAACATGGGTTGGTCCAAACATATGCAACTACACAGGCTTCTATTGTGACAACCCACCCGACAACCTCACCGCCACCACCATCGCCTCCATAGATTTCAACGGCTTTCAACTTTCTGCTCCTACGCTCGATGGCTTCGTCGACCAGCTCCTCGATTTAGCACTTTTCCATGCAAATACCAATAATTTCTACGGCACAGTTTCACCAAAAATAGCAGGACTTAAATACTTATATGAACTTGATTTAAGTAACAACTTGTTCTCTGGGGTAGTTCCTATGTCAATTCTAAACATACCCACCTTGTCCTTTTTGGACATTAGGTACAATTTCTTCACCGGTACGTTACCCCCACACATTTTCATGAAAACCTTAGATGCACTTTTCCTCAACAACAACAATTTCATGCTCACACTTCCTAACAATTTAGGTAACACGTTAACAGTTTATCTCACTTTAGCTAACAACAAATTCACTGGCCCAATTCCACCTAGCATTGGAAAAGCCTCTTCAACATTGAGAGAAGTGTTACTATTGAACAACCTTTTAACGGGTTGTCTTCCCTATGAAATAGGGTTTCTAAAAAAGACAATTTTGTTTGACTCGGGTAACAACCTCTTAACTGGGCCACTACCTTATTCCTTTGGTTGTTTGGAGAAAGTGGAGCAGCTCAATCTGGCTAGAAACTTGTTGTACGGAGAGGTTCCTGAATTGGTGTGCGCGTTGGGGAATTTGGTGAATCTATCGTTGTCATTTAATTATTTCACGAGAGTGGGGCCATTGTGTAAGAAACTGATTAAAATTGGTGTTCTTGATGTGAGGCAGAATTGTATTTTTGGCTTACCTGATCAGAGATCGGTGAAGGAGTGTAGGACATTTTTCTTGATCTCAAGGTCTTGTTCGAACCCTGCATCGTTTAAAATTGTACCATGTAAGATTCCTCCATTGTGGGAACCTCAGGTCAAAACTCAAAGTCGGAGGCATTTGCTGTCATATTCTGCTCTTTCAAGAAATAGAGTTTTGTAA 1239 0.4011 MVLFNQASLSKLKTCTILLCILLVDCQILESASQSLPLVPDILTFIDKRLALVFPIIQNFKKTITSDPFGVTTTWVGPNICNYTGFYCDNPPDNLTATTIASIDFNGFQLSAPTLDGFVDQLLDLALFHANTNNFYGTVSPKIAGLKYLYELDLSNNLFSGVVPMSILNIPTLSFLDIRYNFFTGTLPPHIFMKTLDALFLNNNNFMLTLPNNLGNTLTVYLTLANNKFTGPIPPSIGKASSTLREVLLLNNLLTGCLPYEIGFLKKTILFDSGNNLLTGPLPYSFGCLEKVEQLNLARNLLYGEVPELVCALGNLVNLSLSFNYFTRVGPLCKKLIKIGVLDVRQNCIFGLPDQRSVKECRTFFLISRSCSNPASFKIVPCKIPPLWEPQVKTQSRRHLLSYSALSRNRVL 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0751 412 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 24 409 - -
Lal16g0751 412 Gene3D Ribonuclease Inhibitor 56 216 IPR032675 -
Lal16g0751 412 Gene3D Ribonuclease Inhibitor 219 384 IPR032675 -
Lal16g0751 412 PANTHER SCOPOLETIN GLUCOSYLTRANSFERASE 24 409 - -
Lal16g0751 412 SUPERFAMILY L domain-like 61 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0751 Lal-Chr16 4853965 4855203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0751 43 377 Leucine-rich Repeat extension Gene Families AT3G24480 44.179 1.65e-88 275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0751 16 4853965 4855203 Lal15g0720 15 5022333 5027064 LSH
Lal16g0751 16 4853965 4855203 Lal23g1294 23 13946114 13950044 LSH