Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0738 ATGGGTCTTGTTTCGAATCAACGACGCTCGAGAACAGAGACGACCCATGAAGGTTTACCGGCTACCATTTCTTCCGGTGGTGGAGCTATTCCGAAAAAGAAATGGTCGAATTTAATGACTCTCTTTGTAGCCCTTGTTGTGATCGCAGAGATCGCGTTTCTGGGGAATATTGATATGGCGAAGAATGCAGCCATGGTTGATACCCTCGCTGACCTTTTCTACCCATCGCGGGTTGCGGTTGTAGGTGGCGATGGTGGTGATGGCGGTGATGGTGATTCGGGGTTAGCTGTGATGAGTAGTGTTCAGAATTCGGAATCTGAGAGCTGTGAGGAATGGTTGGAGAGAGAAGATGGTGTCACCTATTTAAGGAATTTTACACAGGAACCTGTTTTTGTTTCTGGAGCTGGCCAGAAGTGGAATTCGTGTTCAGTGGGATGTAAATTTGGGATTAATAGGGATAAGAAACCTGATGCTGCATTTAAAACAATTCAAAAAGCTGGAGCAAGTGTTCTGAGATCAATGGAATCGGCTGAATACTATCCTGAGAACAATATTGCCATGGCACGACGGAGAGGATATAATGTTGTAATGACAACCAGTCTATCATCCGATGTTCCTGTCGGATATTTTTCGTGGCCTGAGTATGACATCATGGCACCGGTAAAGCCAAAAACTGAAAGTGCTCTTGCAGCTGTGTTCATTTCCAATTGCGGTGCTAGAAATTTCCGGTTGCAAGCTCTTGAAGCCCTTGAAAAAGCAAACATCAAGATTGATTCTTATGGTGGTTGTCATAGGAACAAGAATGAAAGAGTGAACAAATTGGAAACCCTGAAGCGCTACAAGTTTAGCTTAGCATTTGAAAATTCTAATGAGGAGGATTATGTAACTGAAAAATTCTTCCAGTCCCTAGTTGCTGGAACTGTCCCTGTGGTTGTTGGTGCTCCAAATATTCAGGATTTTGCTCCTTCCCTCGGTTCAGTTTTACATATTAAAGAGGTAGAAGATGCCGAGTCCATTGCCAAGACCATGAAACATCTAGCAGAAAATCCTGAAGCATATAATCAATCATTGAGGTGGAAGTATGAAGGCCCATCTGATTCTTTCAAGGCCCTTGTGGATATGGCCGCTGTGCATTCATCTTGCCGCCTTTGCATCCACTTGGCCACAACGATTAGAGAGAAGGAAGAAGCCAGTCCAGGCTTCAAGAAACGCCCTTGTAAGTGCACTAGAGGGTTAGAAACTGTATATCATATCTATGTCAGAGAAAGGGGAAGGTTTGAGATGGAGTCCATTTACTTGAGGTCTAGCAATTTAACACTGGAGGCCTTGAAATCTGCTGTTGCTTCGAAGTTCAAATCCCTGAATCATGTACCTATATGGAAGCCAGAAAGACCTGAAGTACTTAGGGGAGGCAATGAATTGAAAATATACAGAATATACCCTGTTGGGTTGACACAGAGACAAGCTCTTTATTCCTTCAGCTTCAAAGGTGATGTGGATTTCAGGAGTCACTTAGACAGCAACCCTTGTGCAAAGTTTGAAGTCATTTTTGTATAG 1557 0.4348 MGLVSNQRRSRTETTHEGLPATISSGGGAIPKKKWSNLMTLFVALVVIAEIAFLGNIDMAKNAAMVDTLADLFYPSRVAVVGGDGGDGGDGDSGLAVMSSVQNSESESCEEWLEREDGVTYLRNFTQEPVFVSGAGQKWNSCSVGCKFGINRDKKPDAAFKTIQKAGASVLRSMESAEYYPENNIAMARRRGYNVVMTTSLSSDVPVGYFSWPEYDIMAPVKPKTESALAAVFISNCGARNFRLQALEALEKANIKIDSYGGCHRNKNERVNKLETLKRYKFSLAFENSNEEDYVTEKFFQSLVAGTVPVVVGAPNIQDFAPSLGSVLHIKEVEDAESIAKTMKHLAENPEAYNQSLRWKYEGPSDSFKALVDMAAVHSSCRLCIHLATTIREKEEASPGFKKRPCKCTRGLETVYHIYVRERGRFEMESIYLRSSNLTLEALKSAVASKFKSLNHVPIWKPERPEVLRGGNELKIYRIYPVGLTQRQALYSFSFKGDVDFRSHLDSNPCAKFEVIFV 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0738 518 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 227 393 IPR001503 GO:0006486|GO:0008417|GO:0016020
Lal16g0738 518 PANTHER FUCOSYLTRANSFERASE-LIKE PROTEIN-RELATED 34 495 - -
Lal16g0738 518 MobiDBLite consensus disorder prediction 1 23 - -
Lal16g0738 518 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 34 495 IPR001503 GO:0006486|GO:0008417|GO:0016020
Lal16g0738 518 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 134 393 - -
Lal16g0738 518 Gene3D - 172 367 IPR038577 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0738 Lal-Chr16 4774102 4784869 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0738 1 518 Xyloglucan Fucosyltransferase1 AT1G49710 64.571 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0738 K00753 - gmx:100776065 800.045