Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0780 ATGGGGTATAAGAGATGTCTTGAGGTCAATGAATTTGAGGATCTTTCTTTGAACAAGGCCAAACGTCTTGAATCCAACAGTGAACTGCTTTCACTAACAGACAGTTCCTTTGTGAAAAGTGTTATTTGTGGTCACAATGAGGATGGCTTTTACAATATTCAATGGTATGATACTATTCAAGCAGACACTGCCTCTGAAGCTCCTCCAGCTGGTGACTTGAGTGTTCAGACCAGTGGTCACTTCGGTAGCTGGTCTAGTGAGGATGATGCTGGGTCTGGGGCAACATCTTTATCATCGGCCTCTTCAGATTGTTTGGAATTTGATATTCCTCAGAAATCATATGCTCCTTTTGATGACATATGTTCAGCCCCCGATTGCTCCCCCAGAAAACCGGTTCCCATTGGTCCAAATCATCAAGCTGTTATTCCTGTCTGGAGTGGAAAAGTGAATACAATACAGAATTTGGGCATATATAATGATGGCAGTCCATCCTCTGGTTTAGTAACTGATCATGCTGCTCATGACAATGAAGAGAGACTCATGGGCACTTCTTTGCTCCCAGTGCCCCACTCTACCCTTCATTATTCTTCTAAGGGTTACAAGGGTGTAAATGGTAGATCAGAATGTAACTGCCTGGATCAGGGCTCCATCAGATGTGTTCGACAGCATGTTAGGGAAGCACGTGAAAATGTGAGGAAGACTATTGGGATGGAAAATTTTATCAAGTTGGGCTTTTGTGACATGGGAGAGGAAATCGCACTCAAATGGAGTGAAGAAGAAGAGGAGGTTTTTTATGAAGTTGTCTACAGCAATCCTGCATCATTGGGAAGGAATTTTTGGAAGCATTTATCAGCGACATTCCCATCTCGAACCAGTAAGGAAATTGTCAGCTTCTACTTTAATGTCTTTATACTTCAGAGAAGGGCTGCTCAGAACAGATCCAGATTTTTGGATATTGACAGTGACGATGATGAAAGTCATACAAGTAATCCACGGTTTTATGGTTATGAAAATTCAGAAGATGATTCTGATGTTGAGTCTCTTGATGATCAAGATGTTCGCATAGAAAACCAGGATTATTCTGATGAAGAAGATGATGGAAACAGTTATGATGGAAATGAATTTGCTGGATATAAGATAAGCATCACTGAGGAAGATGGGATTGATCAGAGGTCCTCAAAATGCAAGGCGATTTCACAGATTGAGAGTTGGAGTGATACAATTCAGCACCATGATTGTCCTCAAGGGATTCTTAATGATGATTTCGGTGTCAACTATGATTCTTGCACGTCCTTTGAGTGCGATGGTAATATTGATGTGTCTTGCTGTTCTCATGGTTTGCAAGTGCAAGCTACGGAATTCAAACTTGATACTCCAGACAAACTTGATTTGTGTAGCAATGGGATGGAGTATATTTATTTGTTGGAGCCAGACAATGGTGAAGATTGTTATCCTGGGTACTCAACATGTTTGAATACAAATATAGATTTGTTACCTACTTCCAATTTGATAGAAGAGTTTTTTGGCCTTGGTACTCCAGATAGAAAGACCAAAAAAAGCAACTAA 1566 0.4061 MGYKRCLEVNEFEDLSLNKAKRLESNSELLSLTDSSFVKSVICGHNEDGFYNIQWYDTIQADTASEAPPAGDLSVQTSGHFGSWSSEDDAGSGATSLSSASSDCLEFDIPQKSYAPFDDICSAPDCSPRKPVPIGPNHQAVIPVWSGKVNTIQNLGIYNDGSPSSGLVTDHAAHDNEERLMGTSLLPVPHSTLHYSSKGYKGVNGRSECNCLDQGSIRCVRQHVREARENVRKTIGMENFIKLGFCDMGEEIALKWSEEEEEVFYEVVYSNPASLGRNFWKHLSATFPSRTSKEIVSFYFNVFILQRRAAQNRSRFLDIDSDDDESHTSNPRFYGYENSEDDSDVESLDDQDVRIENQDYSDEEDDGNSYDGNEFAGYKISITEEDGIDQRSSKCKAISQIESWSDTIQHHDCPQGILNDDFGVNYDSCTSFECDGNIDVSCCSHGLQVQATEFKLDTPDKLDLCSNGMEYIYLLEPDNGEDCYPGYSTCLNTNIDLLPTSNLIEEFFGLGTPDRKTKKSN 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0780 521 SUPERFAMILY Homeodomain-like 255 303 IPR009057 -
Lal15g0780 521 Pfam Myb-like DNA-binding domain 255 302 IPR001005 -
Lal15g0780 521 PANTHER DNA BINDING PROTEIN 1 518 - -
Lal15g0780 521 Gene3D - 256 317 - -
Lal15g0780 521 MobiDBLite consensus disorder prediction 319 348 - -
Lal15g0780 521 MobiDBLite consensus disorder prediction 67 95 - -
Lal15g0780 521 MobiDBLite consensus disorder prediction 70 95 - -
Lal15g0780 521 PANTHER BNAA08G19780D PROTEIN 1 518 - -
Lal15g0780 521 ProSiteProfiles Myb-like domain profile. 255 303 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0780 Lal-Chr15 5605017 5608420 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal15g0780 Myb_DNA-binding 1.8e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0780 15 5605017 5608420 Lal15g0780 15 5605017 5608420 ECH