Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0740 ATGGAAGGTGTTGTTGGTCTTCTCAAACTTCGTATCAAAAGAGGCATTAATCTTGTAGCTCGAGATACTCGTAGCAGTGACCCTTATGTCATTGTTACCATCGCTGAACAGAAACTGAAAACGGATGTTGTGAAAGATAACTGTAATCCTGAGTGGAATGAAGAATTGACACTATGCATTAGAGATGTTAACATTCCTATACAATTGAAAGTTTGTGACAAAGACACTTTCACTGTGGACGACGAAATGGGCAATGCAGATATAGACATAAAACCATATCTTCATTGTGTGAAGATGGAATTGAATGATCTCCCAGATGGGCACGTAGTCAAGAAGATTCAACCGAACAGGACTAACTGCCTCGCAGAAGAGAGCAGCTGCATATGGAAAAATGGAAAATTGATCCAAGAGATGAGTTTAAGATTGAGAAATGTTAAGTCCGGTGAAGTGATTGTCGAAACTGAGTGGGTTAATCTTCCAGATTCCAAAGGCTTATCAGAGGTTGAGTTTTAG 513 0.3957 MEGVVGLLKLRIKRGINLVARDTRSSDPYVIVTIAEQKLKTDVVKDNCNPEWNEELTLCIRDVNIPIQLKVCDKDTFTVDDEMGNADIDIKPYLHCVKMELNDLPDGHVVKKIQPNRTNCLAEESSCIWKNGKLIQEMSLRLRNVKSGEVIVETEWVNLPDSKGLSEVEF 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0740 170 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 170 IPR044562 -
Lal15g0740 170 SMART C2_3c 7 102 IPR000008 -
Lal15g0740 170 Gene3D C2 domain 4 167 IPR035892 -
Lal15g0740 170 Pfam C2 domain 7 92 IPR000008 -
Lal15g0740 170 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 170 - -
Lal15g0740 170 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 100 IPR035892 -
Lal15g0740 170 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0740 Lal-Chr15 5204040 5205674 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0740 38 166 C2H2 Transcription Factor Family AT1G70790 58.015 1.78e-49 155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0740 15 5204040 5205674 Lal15g0740 15 5204040 5205674 ECH
Lal15g0740 15 5204040 5205674 Lal8g0479 8 3237048 3239338 ECH