Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0737 ATGTCTGATTCATTTAGCACTTTTCACTATACCACTCCAAATTCTACTCTTAATTCAGTTGCAGCTCCTACAATGACTACAACCTCCTCAATGGTTCAACCTTGTTGTATTTGTTATGACAGCAACCATCTCCTCAGTTTCAATCCTCATGCTGATGAAGGAACAAGTAATACAGGTTTCAATGTGAAATCTCAGCAAAGTTCAAGGTGGAGTCCAACACCAGTTCAGTTACTAGTCCTTGAGGAATTGTATAAGCAAGGTACAAAGACACCATCTTCTGAACAAATTCACCAAATAGCTTCACAGTTGCGCCAATTTGGAAAGATTGAAGGCAAGAATGTGTTCTACTGGTTCCAGAATCACAAAGCTAGAGAGCGCCAGAAGCGTCGTCGTTTGGAGATGGAGGAAACTGCTTGTACTCAAGGGTTGAAAGGGACAGGTTGTGGAGTTAAAGAGACAAAGAAGTGGGCATCCACTTCTAACTGCAGTGGACATGCAGAGGAACCTGGTACACTGGATATAGCAGAAAAGGGTTCAAATTGGTGGACTCAAATTGAAGAGAGAGGTATACATGTTTTGAGGACAAACACAGCAGAAAATCCAGCTAAGTGTCCAAATATGGAGATGCCTTGCCTCACTCCAATTACCACAGAATTTACAACTTATGTAGCAGCAAACACTACATGTAATACACAACATTTAACCCCTCAACATTATAATTTACCACTGCTACTCAACAAAGAAAGTTTCAACTATTATGATGAAGAAAATGCATATCCTAGAACCCTTGAACTTTTTCCTCTTAAGAGAGATGGCCAAGATGATCAGAGAAAATCTAGATTCTATGACAATGCTGCTTCTATGGACACTGAAATCACCTCTAACCAGTTTTTCGAGTTTCTTCCTTTAAGGAACTGA 918 0.3998 MSDSFSTFHYTTPNSTLNSVAAPTMTTTSSMVQPCCICYDSNHLLSFNPHADEGTSNTGFNVKSQQSSRWSPTPVQLLVLEELYKQGTKTPSSEQIHQIASQLRQFGKIEGKNVFYWFQNHKARERQKRRRLEMEETACTQGLKGTGCGVKETKKWASTSNCSGHAEEPGTLDIAEKGSNWWTQIEERGIHVLRTNTAENPAKCPNMEMPCLTPITTEFTTYVAANTTCNTQHLTPQHYNLPLLLNKESFNYYDEENAYPRTLELFPLKRDGQDDQRKSRFYDNAASMDTEITSNQFFEFLPLRN 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0737 305 Gene3D - 61 128 - -
Lal15g0737 305 CDD homeodomain 69 129 IPR001356 GO:0003677
Lal15g0737 305 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 26 305 - -
Lal15g0737 305 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 26 305 IPR044555 GO:0003700|GO:0099402
Lal15g0737 305 SMART HOX_1 65 132 IPR001356 GO:0003677
Lal15g0737 305 SUPERFAMILY Homeodomain-like 60 131 IPR009057 -
Lal15g0737 305 Pfam Homeodomain 67 127 IPR001356 GO:0003677
Lal15g0737 305 ProSiteProfiles 'Homeobox' domain profile. 63 128 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0737 Lal-Chr15 5177038 5179459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0737 67 169 Wox Gene Family AT3G18010 52.586 1.86e-32 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lal15g0737 Homeodomain 1.3e-18 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0737 15 5177038 5179459 Lal15g0737 15 5177038 5179459 ECH
Lal16g0770 16 4980680 4983441 Lal15g0737 15 5177038 5179459 LSH
Lal15g0737 15 5177038 5179459 Lal23g0865 23 10963192 10966668 LSH