Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0735 ATGCACTCATTCAACCGGCTACCCAGTAGTGGCCACTCAACGCCGTCGCCGCCACAGTCACCGCTTAGGTCACCCAGACTCCGCCACCAGCGCTCCTCCAAAACCGCTCGCTTCTCTCCGGTTCAACCGCCCGGTCGAACCGTCGCACAGCGGTTCGCATGGGCGTTCCTTTCGGTTCTGCTTCGGAGGCAGGGTTTGTTTCTCTTTGCACCTCTTATATATATCTCTGGAATGCTTCTATACATGGGAACCGCTTCATTCGACGTTGTTCCTATCATAAAGCACCGTCCTGCCCCTGGTTCCGTTTACCGTAGCCCTCAGATCTATGCTAAGCTTCGTTCAGATATGAATTCAGATAATTCCTCTGTTGATGCGATCTCAACAATATGGAAGAGTCCATATAAAGGTGGTCATTGGAAACCATGTGTAAACAGTTCTTTAGAAGGCCTACCTGAATCAAATGGCTACATATATATAGAGGCTAATGGTGGCTTAAATCAGCAAAGGACATCGATATGCAACGCTGTGGCCGTGGCTGGCTTTCTCAATGCTACCCTTGTGATCCCCAACTTCCATTACCACAGCATATGGAAAGATCCTAGTAAATTCAGGGACATATATGACGAAGAATATTTTATCGAAACCTTGAAAAATGATGTACGGGTGGTTGACAAGGTTCCTGAGTACCTAATGGAAAGATTTGGCAGCAACATGACAATCGTTCACAATTTCAGGATCAAAGCATGGTCGTCCATTACGTATTACCGAGATGTGGTACTCCCAAAGTTACTTGAAGAAAAGGTCATAAGGATTTCACCTTTTGCGAATAGATTGTCATTTGATGCTCCACCAGCTGTCCAGCGTCTCAGATGCTTAGCAAATTATGAGGCCTTACGATTTTCAAGTCCTATATTGACCATAGGTGAATCTTTGGTTGAAAGAATGAGAGAACGTAGTGCAATTAATGGTGGCAAATATGTCTCTATACATCTTCGTTTTGAAGAGGATATGGTTGCTTTCTCTTGTTGTGTATTTGATGGGGGAAAACAGGAGAGAGATGACATGATTGCAGCAAGAGAAAGAGGTTGGAAAGGTAAATTTACAAAACCTGGACGAGTTATCCGTCCTGGAGCGATCAGGATCAATGGAAAGTGTCCCCTCACCCCACTAGAGAGTCAGTGCCTTCTTCCATCTCTTCAGGTCGGACTGATGCTGAGGGGAATGGGTTTTACAAAGAATACATCTATCTATTTGGCATCTGGAAAAATATATAATGCTGAGAAGACAATGGCTCCATTACTCGAAATGTTCCCTAATTTGCAAACTAAGGAGACTCTGGCATCTGAAGAGGAACTTGCTCCATTTAAGAATTTTTCTTCCAGGATGGCGGCTATAGATTACACAGTTTGCCTTCATAGTGAGGTGTTTGTCACAACACAGGGGGGTAACTTCCCTCATTTTTTGCTGGGCCACAGAAGATATTTGTATGGTGGACACTCTAAGACAATTAAACCTGATAAGCGGAAGTTAGCATTACTGTTTGACAATCCCAATATAGGATGGAGAGGTCTCAGGCGTCAACTGTTGAACATGAGGTCACATAGTGATTCCAAGGGAGTTGAGCTCAAAAGACCAAATGACTCAATATATAGCTTTCCATGTCCAGGGTGTATGTGCCCTGTCAATAGAACCGAAGGTTCAAGATCTTCGTCAACAACTTGA 1722 0.4425 MHSFNRLPSSGHSTPSPPQSPLRSPRLRHQRSSKTARFSPVQPPGRTVAQRFAWAFLSVLLRRQGLFLFAPLIYISGMLLYMGTASFDVVPIIKHRPAPGSVYRSPQIYAKLRSDMNSDNSSVDAISTIWKSPYKGGHWKPCVNSSLEGLPESNGYIYIEANGGLNQQRTSICNAVAVAGFLNATLVIPNFHYHSIWKDPSKFRDIYDEEYFIETLKNDVRVVDKVPEYLMERFGSNMTIVHNFRIKAWSSITYYRDVVLPKLLEEKVIRISPFANRLSFDAPPAVQRLRCLANYEALRFSSPILTIGESLVERMRERSAINGGKYVSIHLRFEEDMVAFSCCVFDGGKQERDDMIAARERGWKGKFTKPGRVIRPGAIRINGKCPLTPLESQCLLPSLQVGLMLRGMGFTKNTSIYLASGKIYNAEKTMAPLLEMFPNLQTKETLASEEELAPFKNFSSRMAAIDYTVCLHSEVFVTTQGGNFPHFLLGHRRYLYGGHSKTIKPDKRKLALLFDNPNIGWRGLRRQLLNMRSHSDSKGVELKRPNDSIYSFPCPGCMCPVNRTEGSRSSSTT 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0735 573 PIRSF UCP009360 27 563 IPR024709 -
Lal15g0735 573 PANTHER PROTEIN ESMERALDA 1 1 572 - -
Lal15g0735 573 CDD O-FucT_plant 156 502 IPR024709 -
Lal15g0735 573 MobiDBLite consensus disorder prediction 1 44 - -
Lal15g0735 573 PANTHER - 1 572 IPR024709 -
Lal15g0735 573 Pfam GDP-fucose protein O-fucosyltransferase 156 495 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0735 Lal-Chr15 5159977 5167766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0735 121 559 Miscellaneous Gene Families AT1G22460 37.826 5.59e-92 291
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0735 15 5159977 5167766 Lal15g0735 15 5159977 5167766 ECH
Lal15g0735 15 5159977 5167766 Lal23g0866 23 10969560 10978079 LSH