Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0725 ATGATAACTTGGAACGATTTATACAGTGTTTTAACGGCAGTGGTTCCACTCTACGTGGCGATGATCTTAGCTTACGGTTCCGTACGGTGGTGGAAAATATTCTCGCCGGACCAATGCTCCGGCATAAACCGTTTCGTTGCGATATTCGCGGTTCCACTACTTTCCTTCCACTTCATCTCCACCAACAACCCTTACGCCATGAACTTCAGGTTCATCGCCGCCGATACGCTTCAGAAGATCATCATGCTTTTCGCACTTGCTATCTGGACTAACTTCACCGCCAACGGTAGCATCGAGTGGATGATTACAATTTTCTCTCTTTCCACATTGCCTAGCACCTTAATCATGGGAATCCCTCTCTTAATCGCCATGTACGGCGATTATTCCGGCAACCTCATGGTTCAGGTGGTGGTGCTCCAGTGTATCATATGGTACACTCTCCTTCTATTCCTTTTCGAGTACCGCGGCGCGAAGTTACTAATCATGGAACAGTTTCCTGAAACGGCAGCGTCGATCGTGTCGTTCAAGGTTGACTCCGACGTCGTTTCGCTTGACGGTAGGGACTTTCTTGAAACCGACGCTGAGGTCGGCGACGATGGGAAACTTCACGTCACTGTTCGAAAATCAAACGCGTCGCGGAGATCATTTATGATGACTCCACGGCCGTCGAATCTTACCGGAGCTGAGATTTACAGCATGAGCTCATCGCACAACCCTACACCACGTGGTTCTAACTTCAACCACGCCGATTTCTACTCCATGATGGGGTATCAAGCAAGGCATTCCAATTTTGGTGCGACGGATTTGTATTCCGTTCAGTCCACGTCGCGTGGACCCACACCACGTCCATCTAATTTTGAAGAGAACGGTGCAGCAATGGGACAGAATATGAGCTCACCCAGGTTCGGGTTTTACCCAGCACAAACCATGCCGGCATCATACCCGGTTCCGAACCCAGAATTCTCATCCAGTTTTAGTAAAAGCATTAAAAACTCGCAACCACAACCACAATTAGTTCAGAATGGTACTAAATTGAGCCATGACGCTAAAGAACTCCACATGTTTGTGTGGAGCTCAAGTGCGTCGCCAGTATCTGAAAGCGCTGGCCTCCACGTATTCAACGGTGCCGATTTAGGAGCGTCCGATCAAGGTGCTAAAGAGATAAGGATGGTGGTAGCAGAAGAAAATCCTCAAACTGAAGCCAATAAAGTTATAACGGAAGCAGAGTTTGTTCCGGAAGAGTTGAAGTTTCCCACGAAAGAAACCGAACACGTAGAGGAATTGGAAGGGGAGAAAGAAGAACCCAATGGACAAAACAAGCTAGGTTCAAGTTCAACGGCGGAGCTACACCCAGAAGCCACCGCAGCCGCCGGGACTGGTAGGACAAAATATATGCCTCCGACGAGTGTTATGACCCGTCTCATACTCATAATGGTATGGAGAAAGCTTATCCGCAACCCTAACACATACTCAAGCCTCATTGGTGTCATTTGGTCCCTTGTTGCATTTAGATGGCATGTGCATATGCCCAAAATAATAGAGAAATCAATCTCCATACTGTCTGATGCAGGTCTTGGAATGGCTATGTTTAGCTTAGGTCTGTTTATGGCTCTTCAGCAAAAAATGATTGCTTGTGGGAACTCAGTTGCAACATTTGCCATGGCTGTTCGATTCTTGACCGGCCCAGCCGTCATGGCAGCAGCTTCCATCGCTGTTGGCCTTCGTGGCAATCTCTTACGTATAGCTATTGTTCAGGCTGCACTTCCACAAGGAATTGTTCCATTTGTATTTGCAAAGGAGTACAATGTTCATCCAGCCATTCTTAGCACAGCGGTTATATTTGGGATGTTGATAGCACTACCAATTACTCTAGTCTACTACATACTACTTGGCTTGTAA 1899 0.4724 MITWNDLYSVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISTNNPYAMNFRFIAADTLQKIIMLFALAIWTNFTANGSIEWMITIFSLSTLPSTLIMGIPLLIAMYGDYSGNLMVQVVVLQCIIWYTLLLFLFEYRGAKLLIMEQFPETAASIVSFKVDSDVVSLDGRDFLETDAEVGDDGKLHVTVRKSNASRRSFMMTPRPSNLTGAEIYSMSSSHNPTPRGSNFNHADFYSMMGYQARHSNFGATDLYSVQSTSRGPTPRPSNFEENGAAMGQNMSSPRFGFYPAQTMPASYPVPNPEFSSSFSKSIKNSQPQPQLVQNGTKLSHDAKELHMFVWSSSASPVSESAGLHVFNGADLGASDQGAKEIRMVVAEENPQTEANKVITEAEFVPEELKFPTKETEHVEELEGEKEEPNGQNKLGSSSTAELHPEATAAAGTGRTKYMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGVIWSLVAFRWHVHMPKIIEKSISILSDAGLGMAMFSLGLFMALQQKMIACGNSVATFAMAVRFLTGPAVMAAASIAVGLRGNLLRIAIVQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLVYYILLGL 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0725 632 MobiDBLite consensus disorder prediction 419 449 - -
Lal15g0725 632 Pfam Membrane transport protein 10 627 IPR004776 GO:0016021|GO:0055085
Lal15g0725 632 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1 632 - -
Lal15g0725 632 PANTHER AUXIN EFFLUX CARRIER-RELATED 1 632 - -
Lal15g0725 632 TIGRFAM 2a69: auxin efflux carrier 1 632 IPR014024 -
Lal15g0725 632 MobiDBLite consensus disorder prediction 419 436 - -
Lal15g0725 632 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0725 Lal-Chr15 5083668 5089946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0725 1 632 Organic Solute Cotransporters AT1G70940 74.465 0.0 920
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0725 15 5083668 5089946 Lal15g0725 15 5083668 5089946 ECH
Lal16g0763 16 4917484 4922070 Lal15g0725 15 5083668 5089946 LSH