Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0723 ATGATGGAGACTGATACAAAAGGGTCAGTGTCATCCTACTATAACATTCTTGGTGTTAGTTCAGATTCTTCTATTCAAGAAATAAGGCGTGCTTATAGGAAGCTTGCAATGCAATGGCATCCAGATAGGTTGACAAAAACACCTTCTTTATTAGGCGAAGCCAAACGCAAATTCCAGCAAATTCAAGAAGCTTATTCAGTGTTATCAAACACTAAGAAAAGAACCATGTACGATGTAGGCTTGTATGATCCTAAAGAGGAAGAGGATGAGGGATTTTCTGATTTTGTGGAAGAAATGATGTCCCTTGTGGGTCAAGTTAGAAGAGAGGATCATGGAAGGTGGAATTTTTGGTGGTGGCATAAACCATTGAGGAGTGATCCATTTACGCAAAGAGAGAAAGTTTATGGATTGGAGGAGTTGCAATCTATGTTTATGGAAATGGCTGAAGGATTCAAGACCCATTCAATGTATGGTGAAGGACTTCCAGTGCTTGATGAATCCCGGTGCTCAAAGAGGACGCGTTTGGACACAAACATGACCAATAATAAAGGGTCACATTTTCAAGTACCCACAACCTTTAACTTGTATGAAACAAGGGGTTACTGCAATTAA 612 0.3987 MMETDTKGSVSSYYNILGVSSDSSIQEIRRAYRKLAMQWHPDRLTKTPSLLGEAKRKFQQIQEAYSVLSNTKKRTMYDVGLYDPKEEEDEGFSDFVEEMMSLVGQVRREDHGRWNFWWWHKPLRSDPFTQREKVYGLEELQSMFMEMAEGFKTHSMYGEGLPVLDESRCSKRTRLDTNMTNNKGSHFQVPTTFNLYETRGYCN 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0723 203 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Lal15g0723 203 PANTHER PUTATIVE, EXPRESSED-RELATED 2 201 - -
Lal15g0723 203 CDD DnaJ 13 70 IPR001623 -
Lal15g0723 203 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 2 201 - -
Lal15g0723 203 SMART dnaj_3 11 73 IPR001623 -
Lal15g0723 203 Pfam DnaJ domain 13 78 IPR001623 -
Lal15g0723 203 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Lal15g0723 203 PRINTS DnaJ domain signature 14 32 IPR001623 -
Lal15g0723 203 PRINTS DnaJ domain signature 32 47 IPR001623 -
Lal15g0723 203 PRINTS DnaJ domain signature 53 73 IPR001623 -
Lal15g0723 203 SUPERFAMILY Chaperone J-domain 11 87 IPR036869 -
Lal15g0723 203 Gene3D DnaJ domain 10 113 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0723 Lal-Chr15 5069095 5071386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0723 2 78 C2H2 Transcription Factor Family AT1G74250 43.590 1.90e-14 69.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0723 15 5069095 5071386 Lal15g0723 15 5069095 5071386 ECH
Lal16g0757 16 4880764 4882229 Lal15g0723 15 5069095 5071386 LSH