Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0722 ATGGGAATACCTGATAGTTCATTACTAGATCTAATAAAAAAGGTGAGGTCTTGGGTTTCTTGGGGTGGAAGTGATTTGTCATGTGTTTCTGATAAATCTGATATGCACAAAAGTGATTACAAAATGTGTTGTGAGTGCAATAAGAACTTGAATGAGTTGATGACTCAGCACAAATACAATTGCAAAAGTTGTGGTTGTTGGGTATGTGGAGAGTGTATAAGAGGTTGTGGTTTTGTTCCAAATATTGATTCTGATAACAACACTGGAATCAGGGAAACGGTTAGTTCTTGCAAGTTTTGTTCAGGTGATCCTAATAGGAAGAGTAGTGAGAAAGTGCACCCTTCAGCCTCCCCACAAGAGAGTCCAAGACAAAGTCCTGAGCCACATTCACCATGTTTTAGTGTTGAAAGTGAAAGAATTACTTCTCCATTGGATAGTGAATTGAGTCAGAGAAACCACTTTGAAAGCTATTTACAATACCAAGATTGTGGGTATTATCCTCATTCCATGACCAATAGGAGTATAACCTCATCTAGTACTCACCCTTCTTCAGTATCTACTCATCCATCTACCTTCAGGAGTGATGAAGAAGGGATGGAGGATTCTGGGAAGTACTTTGTCAGTCCGTCGCGTACATATTGTGACAATTATTCAGATATAGATTCAAGTAGCATTAGTGCTAGACATGACATTTACAACTATAATTCTGTGGGGTCAAGTCCTTCAGAGAGCCCCTCTAGAATTGGTTTTACTTCTAGTAGGGTTGAGAAGCTCCCTGTGCGGAAGGAGCAAGAGAAAAGCCCCACCTCTCAGTATGATGCTCCCACTGGTAAACAAAGTATGGCGGTTTTAAGAAAGCCTGAACCAGGGATTGAGGATGCTTATAACACTGCTTACTTTTCTGATCACTTATCAATTTTCCGGAACCAGAATGAAAATTCACAAAGGCCATTGGATTTTGAAAACAATGGTCTTATCTGGTTCCCCCCACCGCCTGATGATGAAAATGACGATGCAGATGGTGACTTCTTTGCTTATGATGATGAGGATGATGATATTGGTGACTCAGGTACTTTTGTCTCATCCAGTAGTCTATCTAATATGTTTCCGGCCAAGGAGAAACATAACGAGGAAGGCAAAGAACCTTTAAAAGCTGCTATACATGGGCATTTTAGAGCTCTTGTTTCACAGCTTTTAGTGGGAGAGGGAATTAAAGTCGGTAGTGAAAGTAATTCTGAGGACTGGCTTGACGTAGTTGCATCACTAGCATGGCAGGCTGCTAACTTTGTGAGACCAGATACCAGAAAAGGAGGCAGTATGGATCCTGGTGATTATGTAAAGATCAAATGTATAGCATGTGGAAGACCAAGTGAGAGCACCCTTACTAAAGGAGTAGTCTGTACAAAAAATATTAAGCATAAGCGCATGACGTCTCAATATAAAAACACAAGGCTACTCCTTCTTGGAGGAGCTCTGGAATATCAAAAAGTTCCAAATCAACTGGCTTCTTTTAATACACTGTTGCAGCAGGAAAATGATCACCTGAAGATGATTATTTCAAAAATTGAGGCTCTTCGACCAAATGTTCTCCTGGTAGAGAAAAGTGTAGCTCCATACGCCCAGGAATATTTGCTGGCAAAGGAGATATCTTTGGTATTGAATGTTAAAAGGCCTTTGCTAGAGCGTATAGCTCGCTGCACTGGTGCTCTTATCACTCCTTCAGTGGATAATTTATCTAAAGCATGCTTGGGGCATTGCGAATTGTTTCATTTACAAAGAATGGTAGAAGATCATGAGTCTGCTAATAATTTGAACAAAAAGGCATCCAAAACATTAATGTTTTTTGAAGGTTGTCCTCGGCGTTTGGGTTGCACGGTCTTACTGAAGGGAACATGCCGTGAAGATTTAAAGAAAATTAAGCATGTTGTACAATTTGCAATTTTTGCCGCCTATCATTTATCTCTTGAGACCTCATTCCTTGCTGATGAACGTGCGACCCTACCTAAAACGATAGTAAAACACTCAACTCACATGTCAGAGAGTGAAACAGCTGATACTGATTTGATGCTTGAAAGTTTTGGTTCAGCTCAAGAGCCTCATGATGACCTATGTTTAAACTCACATACATGCACCACTGAGGGTTATAGGCTTGAGAATTTACCCTTGGATTGTGATTTGACTGCAGAACCAGATTATTTGAATCAGTGCCATGAATCAGAAGGGGACACTATATCTAATATGAGAGACCTTTTGAAACCAGAGTTGCAAGAAGCCGTGGTTCAAGAGGAGAGGGGTTGTGGTGAAGTTGCTGAGCCAATGAAAGACAAAATCAATGAGGAGTTTTCTAGTGAATACTTTTCCACCACTGATTGTCATCAGAGCATATTGGTGTACTTTTCCAGTCACTGTGTATCAAAAGGAGTCGTATGTGAACGCACTAGGTTGCTGCGCATAAAGTTTTATGGTTCTTTTGATAAGCCACTTGGGCGATATCTTCGTGATGATCTGTTTGATGAGTCATCTTACTGTCAGTCTTGTAAAGAGCCAGCAGAGGCTCATGTCCTTTGTTTTATGCACCAGCAAGGGAATCTTACAGTCAATGTTCGGCGCCTTCCCTCTGTGAAGTTACCAGGCGAAAAAGATGGAAAGATTTGGATGTGGCACCGATGTCTGAGGTGTCCTCAGATGGATGGAGTTCCACCAGCAACTCAGAGAGTCATCATGTCAGATGCTGCCTGGGGATTGTCTTTTGGGAAGTTCTTGGAACTTAGTTTTTCAAACCATGCAACTGCAAATCGAGTTGCAAGCTGTGGCCATTCTTTGCAGAGGGATTGCCTCCGCTTTTATGGGTTTGGGAGTACGGTTGCTTTCTTCCGATATTCCCCGATTGATGTTCTTTCTGTCCATCTACCCCCATCTGTGCTGGAATTTGGTCACGTCCAAGATGAGTGGGTTAGAAAGGAGGCAGGAGAGCTTTTAAGTAAAGTGGAAACCTTGTATGCGGAGATATTAGCTGTGCTTGAACGGTTCGAAACAAAGATCACATCTCCTGGTACTGGGAATGAGCTATCAGATACCATTAACATTTTTAACCACATAGTGGAGCTGAAAGATATGCTTCAAATAGAAAGAGCTGATTATCATAGTTTGCTACAATCGGCCCCAGAGACTCCACAACCAGGGAAGGTGGCTTTAGACATTCTGGAACTAAATTGCTTGAGACGTTCACTTCTAATTGGTTCACATGTTTGGGACACCCGGCTAAACTCGTTGGACTCTCTTATTAAAAGAAGTTTAACTTCCAAAGTTGAAACAGTGAGTGAATTATGTGCAGAGGTTAAAGAATTAAGAGTTGACTCATTTCACAATGGTCGGAGTTCTGGCAGTGGGCTTGAGCAAAATAATCCGCAGCCTTTAAAATTGCGCGAATCTGATGAGAATGAAAGTCATATGCTTGGAGTGCAGGATGACACACTTGAACCACATGCTTCTGAAGCCTTTACATCATATGATCTTGATGGGAACGAAGTACATTCAGATGGTGAATTTGTTGCTAACAAAACATTATCCCAGTGTTTCCCACAAGAGGAATCCAATCTTTCTGAGAAAATAGATTCTGCATGGACTGGTACTGATCAATTGCCATTGAAGGTTGAACCACTTCATACATATCAACCGAATGTTATCCAAGCTGGATCTCTTTCGCGTGCTAACCAAAACGACAACCCTCCCTTTAGAAGGTTGAAGCAACCAATTAGAGTTCAGTCTTTTGATTCAGCACTAAGACTTCAGGAGAGAATCAGGAAAGCCAACCCTTTATCACATTTGTCGCAAGTTAGGTCTTTTCACGCTTCTAGAGATTACAGAAATATGATTAAAGAGCCTGTCTCTAATGTATCGGAAACCAACTATCAAATGTTGCCATGGGAGACGCAGAAGCTAAATCTGATACTGAGCTCAACTCCATCATTCATTTCCTCCGTGTCTCACATAGCTGACGGTGCTCGGTTGCTGGTTCCCCGAACACATAATAGTGATAGAGTTATTGCTGTTTACGACAATGATTACTCTAGCATAATATCTTATGCCCTTAGTTCCAGGGAGTATGAAGATTGGGTTTCTGATAAGTCAGATGTAGATGATGGGAGTTGGGATGCTAGCGAGAGAAACAAAGAAGATTCAGCTACTTCCAGCTTTTCCGCATGGGCCTCTATGGACTTGGATTATATCAATTATGGTAGTTATGGGCCTGAAGATGCTGCATCTTCTATTGGTTCACGTCTCAAGGACACCAAAAAACCTTTACACTTACAAGTTTCTTTTGGCGATGATTCTTTGGGTTCCGGGGGTAAAGTGAATTTTTCTGTCACATGCTATTTTGCAAAGCAGTTTGAATCACTTATAAGGAAGTGCTGCCCTAATGAAGTTGATTTCGTTCGATCCCTGAGCCGTGGACAGAGATGGAGTGCACAAGGAGGGAAAAGTAATGTGTATTTTGCCAAGTCGTTGGACGAAAGATTAATTATTAAACAAGTCACGAAGACAGAGTTAGATTCATTTGAAGAATTCGCACCTCAGTATTTCAAATACCTGATGGATTCTATGAACTCTGGAGGCCCAACTTGCCTTGCCAAAATTCTCGGTATTTATCAGGTCATTGTCAAGTACCCTAAAGGTGGCAAGGAAACAAAAATAGATCTGATGGTAATGGAGAACCTCTTCTATAATAGGAAGATATCCAGGGTATATGACCTTAAGGGCTCAGAAAGATCTAGGTACAATTCAGATACAACTGGGAGAGACAAAGTAATGCTTGACATGAATCTGTTAGAAGCATTGAGAACGAAACCCATATTTCTCGGGAGTAGGGCTAAGCGAAGACTCGAGAGAGCTGTGTGGAACGACACGTCCTTTTTGGCATCTGTTGATGTTATGGATTATTCGTTGCTGGTCGGGGTGGACGACGAGCGCAAGGAACTGGTTTTAGGGATCATTGATTTCATGAGACAATACACATGGGACAAACATTTGGAAACATGGGTAAAAGCTTCTGGGATACTTGGTGGTCCAAAAAATGCAGCCCCCACTATTGTTTCTCCTAAACAATATAAGAAAAGATTCAGGAAGGCTATGACTACTTACTTTCTCACCTTACCTGATCAATGGTCATCTTGA 5175 0.4143 MGIPDSSLLDLIKKVRSWVSWGGSDLSCVSDKSDMHKSDYKMCCECNKNLNELMTQHKYNCKSCGCWVCGECIRGCGFVPNIDSDNNTGIRETVSSCKFCSGDPNRKSSEKVHPSASPQESPRQSPEPHSPCFSVESERITSPLDSELSQRNHFESYLQYQDCGYYPHSMTNRSITSSSTHPSSVSTHPSTFRSDEEGMEDSGKYFVSPSRTYCDNYSDIDSSSISARHDIYNYNSVGSSPSESPSRIGFTSSRVEKLPVRKEQEKSPTSQYDAPTGKQSMAVLRKPEPGIEDAYNTAYFSDHLSIFRNQNENSQRPLDFENNGLIWFPPPPDDENDDADGDFFAYDDEDDDIGDSGTFVSSSSLSNMFPAKEKHNEEGKEPLKAAIHGHFRALVSQLLVGEGIKVGSESNSEDWLDVVASLAWQAANFVRPDTRKGGSMDPGDYVKIKCIACGRPSESTLTKGVVCTKNIKHKRMTSQYKNTRLLLLGGALEYQKVPNQLASFNTLLQQENDHLKMIISKIEALRPNVLLVEKSVAPYAQEYLLAKEISLVLNVKRPLLERIARCTGALITPSVDNLSKACLGHCELFHLQRMVEDHESANNLNKKASKTLMFFEGCPRRLGCTVLLKGTCREDLKKIKHVVQFAIFAAYHLSLETSFLADERATLPKTIVKHSTHMSESETADTDLMLESFGSAQEPHDDLCLNSHTCTTEGYRLENLPLDCDLTAEPDYLNQCHESEGDTISNMRDLLKPELQEAVVQEERGCGEVAEPMKDKINEEFSSEYFSTTDCHQSILVYFSSHCVSKGVVCERTRLLRIKFYGSFDKPLGRYLRDDLFDESSYCQSCKEPAEAHVLCFMHQQGNLTVNVRRLPSVKLPGEKDGKIWMWHRCLRCPQMDGVPPATQRVIMSDAAWGLSFGKFLELSFSNHATANRVASCGHSLQRDCLRFYGFGSTVAFFRYSPIDVLSVHLPPSVLEFGHVQDEWVRKEAGELLSKVETLYAEILAVLERFETKITSPGTGNELSDTINIFNHIVELKDMLQIERADYHSLLQSAPETPQPGKVALDILELNCLRRSLLIGSHVWDTRLNSLDSLIKRSLTSKVETVSELCAEVKELRVDSFHNGRSSGSGLEQNNPQPLKLRESDENESHMLGVQDDTLEPHASEAFTSYDLDGNEVHSDGEFVANKTLSQCFPQEESNLSEKIDSAWTGTDQLPLKVEPLHTYQPNVIQAGSLSRANQNDNPPFRRLKQPIRVQSFDSALRLQERIRKANPLSHLSQVRSFHASRDYRNMIKEPVSNVSETNYQMLPWETQKLNLILSSTPSFISSVSHIADGARLLVPRTHNSDRVIAVYDNDYSSIISYALSSREYEDWVSDKSDVDDGSWDASERNKEDSATSSFSAWASMDLDYINYGSYGPEDAASSIGSRLKDTKKPLHLQVSFGDDSLGSGGKVNFSVTCYFAKQFESLIRKCCPNEVDFVRSLSRGQRWSAQGGKSNVYFAKSLDERLIIKQVTKTELDSFEEFAPQYFKYLMDSMNSGGPTCLAKILGIYQVIVKYPKGGKETKIDLMVMENLFYNRKISRVYDLKGSERSRYNSDTTGRDKVMLDMNLLEALRTKPIFLGSRAKRRLERAVWNDTSFLASVDVMDYSLLVGVDDERKELVLGIIDFMRQYTWDKHLETWVKASGILGGPKNAAPTIVSPKQYKKRFRKAMTTYFLTLPDQWSS 1724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0722 1724 Pfam TCP-1/cpn60 chaperonin family 411 651 IPR002423 GO:0005524
Lal15g0722 1724 MobiDBLite consensus disorder prediction 111 136 - -
Lal15g0722 1724 MobiDBLite consensus disorder prediction 1122 1138 - -
Lal15g0722 1724 MobiDBLite consensus disorder prediction 173 192 - -
Lal15g0722 1724 SMART PIPK_2 1427 1716 IPR002498 GO:0016307|GO:0046488
Lal15g0722 1724 MobiDBLite consensus disorder prediction 235 279 - -
Lal15g0722 1724 CDD Fab1_TCP 392 664 - -
Lal15g0722 1724 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 37 105 IPR017455 -
Lal15g0722 1724 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 1 1721 - -
Lal15g0722 1724 SUPERFAMILY SAICAR synthase-like 1448 1715 - -
Lal15g0722 1724 Gene3D GroEL 457 630 IPR027409 -
Lal15g0722 1724 MobiDBLite consensus disorder prediction 1121 1160 - -
Lal15g0722 1724 PANTHER 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1C-RELATED 1 1721 - -
Lal15g0722 1724 MobiDBLite consensus disorder prediction 235 251 - -
Lal15g0722 1724 CDD FYVE_like_SF 42 100 - -
Lal15g0722 1724 Gene3D - 1573 1716 - -
Lal15g0722 1724 SUPERFAMILY GroEL apical domain-like 458 630 IPR027409 -
Lal15g0722 1724 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1424 1572 IPR027484 -
Lal15g0722 1724 CDD PIPKc_PIKfyve 1452 1715 IPR044769 GO:0000285
Lal15g0722 1724 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1491 1657 IPR002498 GO:0016307|GO:0046488
Lal15g0722 1724 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1391 1715 IPR002498 GO:0016307|GO:0046488
Lal15g0722 1724 MobiDBLite consensus disorder prediction 1139 1155 - -
Lal15g0722 1724 MobiDBLite consensus disorder prediction 102 136 - -
Lal15g0722 1724 MobiDBLite consensus disorder prediction 173 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0722 Lal-Chr15 5046136 5054403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0722 1 1724 Acyl Lipid Metabolism Gene Families AT1G71010 52.069 0.0 1643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0722 15 5046136 5054403 Lal15g0722 15 5046136 5054403 ECH
Lal15g0722 15 5046136 5054403 Lal23g0870 23 11037067 11045270 LSH
Lal14g1625 14 16645623 16656604 Lal15g0722 15 5046136 5054403 PCT