Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal14g1518 | ATGGGTTTCTCCTCTCTCCACGTCTGCATGGATTCATCAGATCATTGGTTGCAGGGTACAATTCAGGAGGATTCCAAGTTAGATTCTTCAACTTCATCATCTGCAGCAGACATGCTTACATGCTCAGGACCCATGATGGACATGGATCAGAGGAAGCTAAGACCTCCAAAAGACCAAGCACTCAAGTGCCCAAGGTGTGATTCAACTCACACCAAGTTCTGCTACTACAACAACTACAGTCTCACCCAGCCTAGGTACTTCTGTAAGACTTGTAGAAGGTACTGGACCAAAGGAGGCACTCTTAGGAACATTCCTGTTGGTGGTGGCTGTCGAAAGAACAAGAAAGTTTCCAATTCCAAGAAACCCAATAATAATGACCAATCACCTATTACTCAAAACCAAGCACATCAAGCACTAGTGCCTAATTCTTACCATCTCAACCCCAAAGACTGTTTTCAACTTCCTTTCCAAGCTGATGTGCAATTTTCCCACCTCAACGATTTCTTTGGGACTAATGCTGGTGCACTCGGAAACCCTAATTTTATGGAGAACCCTAAGCCTAACATGTCCAGAAATATTGATATTTTTGGGAATAGTGATCATATGGGTTTGATGGGTCTTGGGCTTGGAGATCATGTAAATGGTTACAATGGGGTGTTACCAACAAATTATCAAGGTCTTTGCTTTGGAGGAATGTCCCTTGATGGGAATAATGGTGGAACTAATTACCTAATGGAAACGTGTCAAAGATTGATGCTGCCTTACGAGTCAGGTGATCATGGCCAAAATGGTTCAATTGATGATGTGAAGCCAAACCCTAAGGTATTGTCCCTTGAATGGCACAACCAGGGTTACTCAGTTCCTGAATATACTAACAACGGTTCAGGATCATGGAGTGGCATGATGAACGGATATGGATCTTCCACAACAAACCCTTTGGTCTAG | 945 | 0.4317 | MGFSSLHVCMDSSDHWLQGTIQEDSKLDSSTSSSAADMLTCSGPMMDMDQRKLRPPKDQALKCPRCDSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSNSKKPNNNDQSPITQNQAHQALVPNSYHLNPKDCFQLPFQADVQFSHLNDFFGTNAGALGNPNFMENPKPNMSRNIDIFGNSDHMGLMGLGLGDHVNGYNGVLPTNYQGLCFGGMSLDGNNGGTNYLMETCQRLMLPYESGDHGQNGSIDDVKPNPKVLSLEWHNQGYSVPEYTNNGSGSWSGMMNGYGSSTTNPLV | 314 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal14g1518 | 314 | Pfam | Dof domain, zinc finger | 58 | 115 | IPR003851 | GO:0003677|GO:0006355 | |
Lal14g1518 | 314 | PANTHER | DOF ZINC FINGER PROTEIN DOF5.6-LIKE | 18 | 306 | - | - | |
Lal14g1518 | 314 | ProSitePatterns | Zinc finger Dof-type signature. | 63 | 99 | IPR003851 | GO:0003677|GO:0006355 | |
Lal14g1518 | 314 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 18 | 306 | IPR045174 | GO:0003700|GO:0006355 | |
Lal14g1518 | 314 | MobiDBLite | consensus disorder prediction | 106 | 130 | - | - | |
Lal14g1518 | 314 | ProSiteProfiles | Zinc finger Dof-type profile. | 61 | 115 | IPR003851 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal14g1518 | Lal-Chr14 | 16002580 | 16004399 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal14g1518 | 1 | 111 | C2C2-Dof Transcription Factor Family | AT5G62940 | 65.079 | 2.73e-42 | 148 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Lal14g1518 | zf-Dof | 3.1e-33 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal14g1518 | - | - | lang:109363070 | 596.66 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal14g1518 | 14 | 16002580 | 16004399 | Lal19g1079 | 19 | 14501402 | 14503366 | LSH | |
Lal14g1518 | 14 | 16002580 | 16004399 | Lal4g1129 | 4 | 14702982 | 14705378 | PCT | |
Lal4g1129 | 4 | 14702982 | 14705378 | Lal14g1518 | 14 | 16002580 | 16004399 | PCT |