Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1201 ATGGGTCAAGGGCATGATAGTGAAGGAATTAAGCTGTTTGGCACAACAATCACATTGCATGGTAAACAAAGAAGCGAAGATAAGAATGAAAATGAAGATGAGAAAGAGAAGAAAAAAGTTGATAATAATAAGATCATGGTTTGTCCAAGATGCAAGAGCATGGAGACAAAGTTTTGTTACTTCAATAACTACAACGTTAATCAGCCTAGACATTTTTGCAAGGGCTGCCAGAGGTACTGGACCGCCGGTGGCGCCCTCCGCAACGTGCCTATAGGGGCAGGCCGCCGGAAGGCAAAGCCACCCGGCGGTTTTCTGGACGGTGGATTTTATGATGAATCCACCACCGTCCAAAAGTTTAGTGTTCATGAGGGTTTGGTTTTGGAAGAGTGGAAAGTTGCCACCGTGGACCACCGTGATTACCGGCAATTATATCCATCTAAACGGCAGAGGATCAGCTCAGGTGGTACTGGTCAACCTTGTTAA 483 0.4576 MGQGHDSEGIKLFGTTITLHGKQRSEDKNENEDEKEKKKVDNNKIMVCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKAKPPGGFLDGGFYDESTTVQKFSVHEGLVLEEWKVATVDHRDYRQLYPSKRQRISSGGTGQPC 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1201 160 PANTHER DOF ZINC FINGER PROTEIN DOF1.5-LIKE 5 155 - -
Lal14g1201 160 MobiDBLite consensus disorder prediction 1 38 - -
Lal14g1201 160 Pfam Dof domain, zinc finger 44 99 IPR003851 GO:0003677|GO:0006355
Lal14g1201 160 ProSiteProfiles Zinc finger Dof-type profile. 46 100 IPR003851 GO:0003677|GO:0006355
Lal14g1201 160 PANTHER CYCLIC DOF FACTOR 2 5 155 IPR045174 GO:0003700|GO:0006355
Lal14g1201 160 ProSitePatterns Zinc finger Dof-type signature. 48 84 IPR003851 GO:0003677|GO:0006355
Lal14g1201 160 MobiDBLite consensus disorder prediction 21 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1201 Lal-Chr14 13992546 13993028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1201 6 155 C2C2-Dof Transcription Factor Family AT2G34140 51.205 3.84e-52 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lal14g1201 zf-Dof 1.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1201 - - vra:106779806 204.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1201 14 13992546 13993028 Lal14g1201 14 13992546 13993028 ECH