Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g1033 ATGGGTTTGGTTCAATTATCTGCAATCATATTCACAGTGATAGCTTTTCTGGGTTCATCAACACAGGCTCAACCAGAAGCCAAGTTCAAGTGTTCAACAACAAATGCCACGTGTCATGCACTGATTGACTACAAGAACCCTAACGCCACCACCCTCCGCTACATCCAAACACTCTTCAACGTTAAACACCTCCAAGACATCCTCGGCGCTAACAACTTCCCCACCAACACCACAGGTAACTATAGTGTGGGTCCCAACGAGGCAATTAAGGTCCCTTTCCCGTGCAAGTGCAACAATGGGACGGGTCTATCGAACCTTGTTCCGCTCTACACCATCAAAGCCGGTGATGGTTTATACGACATAGCAACCACCACTTTTGCAGGCTTGGTCAAGTACCCTCAGATCCAGGTGGCTAATAATATATCGGATCCGAATAAGATAATAACTGGGCATAAGTTATGGATCCCTTTGCCATGTAGCTGTGATGAGGTGGGTGGGGAAAGTGTGGTGCATTATGGGCATTTAGTGGAGTCAGGGAATAGTGTGGAAGGGATTGCTGACAAGTATGGGACTACACAGCAAGTACTTCTAACTCTCAATGGGATTTCTGACCCAAAGACCCTTCAGGCTGGTCAAGTTCTTGATGTTCCCCTCAAAGCTTGTTCCTCAAGTGTGAGAAATGACTCATTGGACTTCCCTTTGCTTGTTGCAAATGCTACTTACATCTATACTGCTAATAACTGCGTCAAGTGCAAGTGTGATTCCAGCAACAACTACATATTACAATGTGAGCCATCATCACAATTCAAACCAACCAAATGGTCCACTTGCCCCTCTACGCAATGTTCAAGCAACTTATTCATTGGCAACATTAAGTCTACAGATTCCTGCAATAGCACAACCTGTGACTATGCTGGTTATACTTCCAAAAACATCTCTACAGTTCTTGCAACTCACTCCACTTGTGCTGCAGCAGCACCAAGTGGTTCAGATCCAGGGTCAGGAGCATCAAGGAGCACCTTGCAAGCCGCACTGGCAGAGACCCAGGCTAGCCGAGATAGCTCTATAGTCCAGGCCAATGAACCACAATGTTCGCACTCGTGCCACGCCCACTCAATAGGTTTTGTGGCTAGAGGATCACAATTTTATAAACTCTAA 1158 0.4611 MGLVQLSAIIFTVIAFLGSSTQAQPEAKFKCSTTNATCHALIDYKNPNATTLRYIQTLFNVKHLQDILGANNFPTNTTGNYSVGPNEAIKVPFPCKCNNGTGLSNLVPLYTIKAGDGLYDIATTTFAGLVKYPQIQVANNISDPNKIITGHKLWIPLPCSCDEVGGESVVHYGHLVESGNSVEGIADKYGTTQQVLLTLNGISDPKTLQAGQVLDVPLKACSSSVRNDSLDFPLLVANATYIYTANNCVKCKCDSSNNYILQCEPSSQFKPTKWSTCPSTQCSSNLFIGNIKSTDSCNSTTCDYAGYTSKNISTVLATHSTCAAAAPSGSDPGSGASRSTLQAALAETQASRDSSIVQANEPQCSHSCHAHSIGFVARGSQFYKL 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g1033 385 CDD LysM 174 216 IPR018392 -
Lal14g1033 385 ProSiteProfiles LysM domain profile. 108 155 IPR018392 -
Lal14g1033 385 ProSiteProfiles LysM domain profile. 172 216 IPR018392 -
Lal14g1033 385 SMART LysM_2 173 217 IPR018392 -
Lal14g1033 385 SMART LysM_2 109 156 IPR018392 -
Lal14g1033 385 SUPERFAMILY LysM domain 109 157 IPR036779 -
Lal14g1033 385 Gene3D LysM domain 109 162 IPR036779 -
Lal14g1033 385 SUPERFAMILY LysM domain 173 217 IPR036779 -
Lal14g1033 385 Pfam LysM domain 110 156 IPR018392 -
Lal14g1033 385 Pfam LysM domain 175 217 IPR018392 -
Lal14g1033 385 CDD LysM 110 155 IPR018392 -
Lal14g1033 385 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 14 323 - -
Lal14g1033 385 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 14 323 - -
Lal14g1033 385 Gene3D LysM domain 163 229 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g1033 Lal-Chr14 12615206 12619502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g1033 11 337 LysM Receptor-like Protein (LYPs) Gene Family AT2G17120 48.348 9.94e-101 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g1033 - - lang:109351135 550.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1033 14 12615206 12619502 Lal19g0152 19 1271722 1281768 LSH