Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0406 GTCCATTTTTTTTATTACACGTGTCGCAATCTGAGCGCTCACTGGTCTCCATTACAGGAGAGGAGCGAGACCCATTTCAATGCAGTTTCCATTTTATCAACCAATCCAAATTCTCCTCTCCCTCCTATGTTCCTTTCTTCTCTCAACCCTCTATCTCTATATAACCGTCCTCCTCAGAGTTCAAAAAACAAAACCCAAACATTCATGGCTCTTCCACGTATCCCTTTCGCTTTATTGCTTTCAATCACGTTTCTCTCTCTCTCATTGGCCCTCGACATGTCCATCATTGACTACGACGCTAAGATCGCCGAGACTCACCTCATGAATATGTATGAGGCTTGGCTCCTGAAGCATGGCAAGGCCTACAACGCATTGGGTGAGAAAGAACGTAGGTTTCATATTTTTAAGGACAACGTTCGGTTCGTCGATGACCATAACAAGGCAACAGAGAGAACGTACAAGTTGGGGTTGAACAAGTTTGCTGATCTCACCAATGAGGAGTATAGGAAGATGTATTTGGGTACACGGATGCGTGGATCATTAGGGTTGATATCCACGTTGAAGAAGAGTGATCGTTATGTGTATCATTATGGTGAGGATTTGCCTGCTTCGGTGGATTGGAGGAAGAAAGGTGCAGTTGCTAGTGTTAAAGATCAAGGCCAATGTGGGAGTTGCTGGGCGTTCTCCACGGTTGCTGCGGTGGAAGGTATCAATAAAATTGTAACCGGGAAACTAATACCTCTATCAGAGCAAGAGTTAGTTGATTGTAACAAAAAATATAACATGGGATGCAATGGAGGTCTCATGGACTATGCATTTGAGTTTATTGTCAATAATGGTGGCATTGATACAGAAGATGATTACCCATACCGTGCTAGTGATCGTACATGTGATCCAAAACGGAAAAATGCTCGGGTAGTTAGCATTGATGGATATGAAGATGTTCCACCAAATGATGAACAATCATTGAAGAAAGCTGTTGCATATCAACCTGTTAGTGTTGCCATTGAAGCTGGTGGCAGGGCATTTCAGCTTTATGACTCGGGTGTTTTCACGGGCATCTGTGGAACAGAACTAGACCACGGTGTTGCAGTTGTCGGATATGGAAGTGAGGATGGTAATGATTATTGGTTAGTGAGGAACTCTTGGGGATCAGCATGGGGAGAAAATGGTTACATTAAACTAGAGCGTAACATAAAAACAACTAAGAAAGGTAAGTGTGGGATTGCAATGGAGCCATCCTACCCCACCAAGAATGGTCAAAACCCTCCAAAGCCTGCTTCTTCACCTCCAACTCCTGCATCTCCTGCTTCAACTGTGTGTGATGAATACTACTCTTGCTCTGCGGGAACCACTTGCTTCTGCATGTTTGAGTATGGAAGCCTTTGCTTCAGATGGAGTTGCTGCCCCATTGAATCTGCAACTTGCTGTGATGATCGCTCTAGTTGCTGCCCTCATGAATACCCTGTTTGTGATGTCAAGGCTGGAACTTGCCTCTTGAGCAAAGACAATCCTTTGGGAATCAAAGCTTTTAAAAGAACTCCTGCTACAAGTACTTGGACCCAAAGGAAAGCTGCCATGAAAACTAAGTTTGTATGA 1599 0.4396 VHFFYYTCRNLSAHWSPLQERSETHFNAVSILSTNPNSPLPPMFLSSLNPLSLYNRPPQSSKNKTQTFMALPRIPFALLLSITFLSLSLALDMSIIDYDAKIAETHLMNMYEAWLLKHGKAYNALGEKERRFHIFKDNVRFVDDHNKATERTYKLGLNKFADLTNEEYRKMYLGTRMRGSLGLISTLKKSDRYVYHYGEDLPASVDWRKKGAVASVKDQGQCGSCWAFSTVAAVEGINKIVTGKLIPLSEQELVDCNKKYNMGCNGGLMDYAFEFIVNNGGIDTEDDYPYRASDRTCDPKRKNARVVSIDGYEDVPPNDEQSLKKAVAYQPVSVAIEAGGRAFQLYDSGVFTGICGTELDHGVAVVGYGSEDGNDYWLVRNSWGSAWGENGYIKLERNIKTTKKGKCGIAMEPSYPTKNGQNPPKPASSPPTPASPASTVCDEYYSCSAGTTCFCMFEYGSLCFRWSCCPIESATCCDDRSSCCPHEYPVCDVKAGTCLLSKDNPLGIKAFKRTPATSTWTQRKAAMKTKFV 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0406 532 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 359 369 IPR025660 -
Lal13g0406 532 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 99 446 - -
Lal13g0406 532 Pfam Papain family cysteine protease 201 417 IPR000668 GO:0006508|GO:0008234
Lal13g0406 532 PANTHER CYSTEINE PROTEASE 99 446 - -
Lal13g0406 532 SMART GRAN_2 441 498 IPR000118 -
Lal13g0406 532 CDD Peptidase_C1A 202 416 IPR039417 -
Lal13g0406 532 Pfam Granulin 452 499 IPR000118 -
Lal13g0406 532 Gene3D Granulin 437 500 IPR037277 -
Lal13g0406 532 SUPERFAMILY Granulin repeat 439 472 - -
Lal13g0406 532 SUPERFAMILY Cysteine proteinases 103 417 IPR038765 -
Lal13g0406 532 SMART Inhibitor_I29_2 111 168 IPR013201 -
Lal13g0406 532 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 376 395 IPR025661 -
Lal13g0406 532 Pfam Cathepsin propeptide inhibitor domain (I29) 111 168 IPR013201 -
Lal13g0406 532 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 219 230 IPR000169 -
Lal13g0406 532 PRINTS Papain cysteine protease (C1) family signature 219 234 IPR000668 GO:0006508|GO:0008234
Lal13g0406 532 PRINTS Papain cysteine protease (C1) family signature 361 371 IPR000668 GO:0006508|GO:0008234
Lal13g0406 532 PRINTS Papain cysteine protease (C1) family signature 376 382 IPR000668 GO:0006508|GO:0008234
Lal13g0406 532 SMART pept_c1 201 417 IPR000668 GO:0006508|GO:0008234
Lal13g0406 532 Gene3D Cysteine proteinases 93 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0406 Lal-Chr13 2540039 2543481 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0406 13 2540039 2543481 Lal13g0406 13 2540039 2543481 ECH
Lal8g0649 8 4584723 4588983 Lal13g0406 13 2540039 2543481 ECH
Lal10g0829 10 15922210 15926620 Lal13g0406 13 2540039 2543481 ECH
Lal25g0597 25 4510527 4515859 Lal13g0406 13 2540039 2543481 ECH