Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1548 ATGGCGTCTTCGAGCGCCGCACCTGCTGGATCCGCTGATTCTACTGCTACAATAAGAACTACCAAGCGACCCAATCCTGGACTTGGACCTGCAGGTCCTGTCACTAGACCACTTATGAAACGTGAGAGGACAATGAATGGAGTTTATAATGAACCTGCCAATGGGGCAGATTCAAAGTTTACTCAGCAAGAACTTCCAGCATGCAAGCCGATTCTTACACCACGAGCTGTTATTTCCGCTTTCCTGCTTGTAACTGTTGTATTTGTTCCTATTGGAGTTGTTTCGCTAATGGCTTCACGAAAGGTTGTTGAAATTGTTTACAGATATGAGTCAGAGTGCATACCAGGTGATGTTCAAGACAAGGTAGCATACATTCAGAGTTCTGCAAATAAAACATGCCAGTTAAAGCTGCCGGTGCACAAGCATATGAAGTCACCTATTTATGTTTACTATCAGCTTGACAATTTCTACCAGAACCATCGCCGGTATGTTAAAAGCCGAAGTGATGAGCAGTTGAGGGATCCTAAGAAAGAGAGCTCAACAAGTACTTGTAAACCTGAAGATACTGTAGATGGAAAACCAATTGTACCTTGTGGTCTTATAGCTTGGAGTTTATTCAATGATACATACAGCTTCTCCCGTAACAACGAGAATATTACAGTGAACAAAAAAGGCATCTCCTGGAAGAGTGATAGGGAGCACAAATTTGGAAAAGATGTTTTCCCTAAAAACTTCCAAAATAGTTCTATTATAGGTGGTGCACATCTCATTGAATCCATACCTTTGAGTGACCAAGAAGATCTTATTGTCTGGATGCGAACTGCTGCTTTGCCAACTTTTAGGAAGTTGTATGGAAAGATAGAGGTGGATCTGAATGAAGGTGATAGCATAGATGTTACGCTGGAAAATAACTATAACACATACAGTTTTAATGGCAAGAAAAAGCTTGTGCTGTCAACTACTAGCTGGCTTGGAGGGAAGAATGACTTCCTTGGCATTGCTTATCTCACTGTTGGAGGGTTGTGCTTCTTTTTGGCTTTGGCTTTTACCATTGTATATTTTGTCAAGCCAAGGCAACTAGGAGATCCCTCATACTTGTCATGGAATAGGAATCCAGGAGGCTGA 1125 0.4178 MASSSAAPAGSADSTATIRTTKRPNPGLGPAGPVTRPLMKRERTMNGVYNEPANGADSKFTQQELPACKPILTPRAVISAFLLVTVVFVPIGVVSLMASRKVVEIVYRYESECIPGDVQDKVAYIQSSANKTCQLKLPVHKHMKSPIYVYYQLDNFYQNHRRYVKSRSDEQLRDPKKESSTSTCKPEDTVDGKPIVPCGLIAWSLFNDTYSFSRNNENITVNKKGISWKSDREHKFGKDVFPKNFQNSSIIGGAHLIESIPLSDQEDLIVWMRTAALPTFRKLYGKIEVDLNEGDSIDVTLENNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALAFTIVYFVKPRQLGDPSYLSWNRNPGG 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1548 374 MobiDBLite consensus disorder prediction 166 188 - -
Lal11g1548 374 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 96 359 IPR005045 GO:0016020
Lal11g1548 374 PANTHER ALA-INTERACTING SUBUNIT 3 58 373 - -
Lal11g1548 374 MobiDBLite consensus disorder prediction 1 22 - -
Lal11g1548 374 PIRSF Lem3/Cdc50 38 371 IPR005045 GO:0016020
Lal11g1548 374 PANTHER CELL CYCLE CONTROL PROTEIN 50 58 373 IPR005045 GO:0016020
Lal11g1548 374 MobiDBLite consensus disorder prediction 1 39 - -
Lal11g1548 374 MobiDBLite consensus disorder prediction 166 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1548 Lal-Chr11 18580893 18585343 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1548 11 18580893 18585343 Lal11g1548 11 18580893 18585343 ECH
Lal20g0509 20 4335568 4340974 Lal11g1548 11 18580893 18585343 LSH
Lal11g1548 11 18580893 18585343 Lal2g0692 2 4223595 4228133 PCT
Lal11g1548 11 18580893 18585343 Lal9g0605 9 4084033 4089418 PCT
Lal2g0692 2 4223595 4228133 Lal11g1548 11 18580893 18585343 PCT
Lal9g0605 9 4084033 4089418 Lal11g1548 11 18580893 18585343 PCT