Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1547 ATGGACTTAACACCGCCGCCAATCGACGACGGTTTCACGGCGGAGAAGCTTTTCAACCAGGGTTTCTCCTACACCTACGACGATGTCATCTTCCTCCCTAACTACATCGACTTCCCAGCCGATGACGTCAACCTCTCCACCAAACTCTCCCGCAACGTCAACCTCTCCGTTCCCCTCGTCGCCTCCCCCATGGACACCGTCTGCGAATCCGCCATGGCCATCTCCATGGCCTCCCTCGGCGGCATTGCCATCATCCACTCCAACACCACCGCCGCCGCCCAAGCCTCCCTTGTCCGTACCGCTAAGTCCCGCCGCTTCCCCGTCCTCCACAACCCCGTCTTCCTCCCTCCCTCCGCCGAGATCACCTCCACCGACGACTTCGCTGACTCACCGTTCATCCTCGTCACTGAGTCCGGAAACCCTAAATCCAGCCTCCTCGGGTATGTCTCGAGGCAAGACTGGATAAACTCGGAAGCGAATCGAAGCGATAAAGGCAGTAGTAGGGTTCACGATTATTTAGTAGAAGCACCAGTTACGGTGCCGTGGAGCTATGATTTAGTGAAAATCGATCAAACTTTGAGCGAGAAGAAGACGAATTCGGTAGGTTTGGTGAGTGATGATGGTGAATTGGTTGATTTGGTGACAGAGGATGATGTGGTTAGGGCTAAAGGGTATCCAAAAGTATTGGCAAAGGGATCGGTTGGGGCGAACGGGGAATGGCTGGTGGGGGCGGCAATTGGGACGAGGGAGGAGGATAAGGAGAGATTGGAGCAATTGGTGAAGGCTGGAGTTGATGTAGTGGTACTTGATAGCTCTCAGGGTCACTCTATTTATCAGTTGGAGATGATCAAGTATGTGAAGAATGTGTACCCTGAGATTGATGTGATTGGTGGGAATGTTGTGACTATGAATCAAGCTGAGAGTTTGATTCAGGCTGGTGTTGATGGGTTGAGGGTTGGTATGGGGTCTGGTTCTATATGCACTACACAAGAGGTTTGTGCGGTTGGACGCGGTCAGGCAACTGCTGTTTTCAAGGTCTCGTCCATTGCTTATAAAAGCGGTATTCCTGTTATTGCTGATGGTGGCATCTCAAATTCTGGTCATGTTGTTAAGGCTTTGTCATTGGGAGCATCTACTGTTATGATGGGAAGCTTCTTAGCTGGTAGCACTGAAGCTCCCGGGGCTTATGTATATCAGAATGGTCAACGTGTCAAAAAGTATAGAGGAATGGGTTCTCTGGAAGCTATGACCAAAGGGAGTGATCAAAGGTACTTGGGTGATACAGCAAAGTTAAAAATTGCTCAGGGGGTTGTTGGAGCCGTTAAAGATAAGGGTTCTGTCTTGAATTTCATACCATACACCTTGCAAGCAGTGAAACAAGGGTTTCAGGATATTGGAGCCTGCTCTTTGCAGTCTGCTCACGACCTTTTAAGATCCAAGGAGTTAAGGCTAGAGGTTCGGACTGGAGCAGCACAAGTTGAAGGTGGAATTCATGGGCTGGTTTCTTATGAAAAGAAATACTTTTAA 1527 0.4977 MDLTPPPIDDGFTAEKLFNQGFSYTYDDVIFLPNYIDFPADDVNLSTKLSRNVNLSVPLVASPMDTVCESAMAISMASLGGIAIIHSNTTAAAQASLVRTAKSRRFPVLHNPVFLPPSAEITSTDDFADSPFILVTESGNPKSSLLGYVSRQDWINSEANRSDKGSSRVHDYLVEAPVTVPWSYDLVKIDQTLSEKKTNSVGLVSDDGELVDLVTEDDVVRAKGYPKVLAKGSVGANGEWLVGAAIGTREEDKERLEQLVKAGVDVVVLDSSQGHSIYQLEMIKYVKNVYPEIDVIGGNVVTMNQAESLIQAGVDGLRVGMGSGSICTTQEVCAVGRGQATAVFKVSSIAYKSGIPVIADGGISNSGHVVKALSLGASTVMMGSFLAGSTEAPGAYVYQNGQRVKKYRGMGSLEAMTKGSDQRYLGDTAKLKIAQGVVGAVKDKGSVLNFIPYTLQAVKQGFQDIGACSLQSAHDLLRSKELRLEVRTGAAQVEGGIHGLVSYEKKYF 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1547 508 Gene3D Aldolase class I 11 508 IPR013785 -
Lal11g1547 508 Pfam IMP dehydrogenase / GMP reductase domain 24 498 IPR001093 GO:0003824
Lal11g1547 508 PIRSF IMPDH 11 508 IPR005990 GO:0003938|GO:0006164
Lal11g1547 508 TIGRFAM IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 23 474 IPR005990 GO:0003938|GO:0006164
Lal11g1547 508 PANTHER INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED 8 508 IPR005990 GO:0003938|GO:0006164
Lal11g1547 508 Hamap Inosine-5'-monophosphate dehydrogenase [guaB]. 23 506 IPR005990 GO:0003938|GO:0006164
Lal11g1547 508 ProSitePatterns IMP dehydrogenase / GMP reductase signature. 317 329 IPR015875 GO:0016491
Lal11g1547 508 CDD IMPDH 23 478 IPR001093 GO:0003824
Lal11g1547 508 SMART IMPDH_2 22 498 - -
Lal11g1547 508 SUPERFAMILY Inosine monophosphate dehydrogenase (IMPDH) 13 507 - -
Lal11g1547 508 SUPERFAMILY CBS-domain pair 132 222 IPR046342 -
Lal11g1547 508 PANTHER INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE 1 8 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1547 Lal-Chr11 18576061 18580197 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1547 11 18576061 18580197 Lal11g1547 11 18576061 18580197 ECH
Lal20g0507 20 4326809 4330800 Lal11g1547 11 18576061 18580197 LSH
Lal11g1547 11 18576061 18580197 Lal1g1515 1 17290962 17295073 LSH