Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1545 ATGGAGAGGAGTCCTACTCGGCAACGCAAGATAGCAGATTATTACAAGAAACAGGAAATGCTCCTTGAAGGATACACTGAGATGGACACTATGAATTCAACTGGTTTTTTCCCTGGAAGTCTCACTAAGGATGAAATGAAGCAACTAGCAAAGAGTGAAAGAGTGGCAGTTCTTGTGTCAAATGCATGTAACTTGTTGTTGTTTGGAGCAAAGGTTTTTACATCAATAGAGAGCAAATCATTAGCAGTTATTGCCTCAACACTGGATTCTCTATTGGATCTATTGTCAGGGTTCATATTGTGGTTTACTTCCAATGCCATGAAAACTCCAAATCAGTATCAGTACCCAATTGGAAAGAAACGCATGCAACCAGTGGGTATCATAGTTTTTGCATCAGTGATGGCAACCTTGGGGTTGCAGATTTTGATTGAGTCTGGCAGGGGAATTATTAACAAGACTAAGCCAGAACTTGATCCAGTAAAGTTGAATTGGACGATCGGGATTATGTTGTTAGCAACAGTAGTGAAGTTCATTCTTATGGTGTATTGTAGAAGATTTAAGAATGAAATTGTGAGAGCTTATGCACAAGATCATCTTTTTGATGTCATTACTAATTCAGTTGGTTTAGCTGCTGCTGTCTTATCTGTTAAAGTTGTTTGGTGGATTGATCCAACTGGGGCTATTCTTATTGCATTATATACAATTAATACATGGGCAAATACAGTGATTGAGAATGTATGGTCTTTGATTGGAAGGACAGCACCACCTGATTTTCTGGCTAAGTTAAATTACCTTGTATGGAATCATCATGAACAAATTAAGCACATAGATACAGTTAGAGCATACACTTTTGGTGGATGTTACTTTGTGGAAGTTGATATTATTTTACCAGAGGACATGCATCTCAATGAAGCACACAATATTGGTGAGACACTCCAAATTAAGGTAGAGCAACTTCCAGAAGTTGAAAGAGCTTTTGTACACATTGATTTTGAATTCACTCATAGGCCTGAACATAACACCAATGTATGA 1032 0.3779 MERSPTRQRKIADYYKKQEMLLEGYTEMDTMNSTGFFPGSLTKDEMKQLAKSERVAVLVSNACNLLLFGAKVFTSIESKSLAVIASTLDSLLDLLSGFILWFTSNAMKTPNQYQYPIGKKRMQPVGIIVFASVMATLGLQILIESGRGIINKTKPELDPVKLNWTIGIMLLATVVKFILMVYCRRFKNEIVRAYAQDHLFDVITNSVGLAAAVLSVKVVWWIDPTGAILIALYTINTWANTVIENVWSLIGRTAPPDFLAKLNYLVWNHHEQIKHIDTVRAYTFGGCYFVEVDIILPEDMHLNEAHNIGETLQIKVEQLPEVERAFVHIDFEFTHRPEHNTNV 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1545 343 Pfam Cation efflux family 59 249 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Lal11g1545 343 PANTHER MITOCHONDRIAL METAL TRANSPORTER 1-RELATED 3 342 - -
Lal11g1545 343 Gene3D Cation efflux protein, cytoplasmic domain 254 331 IPR036837 -
Lal11g1545 343 Gene3D Cation efflux protein transmembrane domain 54 249 IPR027469 -
Lal11g1545 343 PANTHER METAL TOLERANCE PROTEIN 9 3 342 - -
Lal11g1545 343 TIGRFAM CDF: cation diffusion facilitator family transporter 55 330 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Lal11g1545 343 SUPERFAMILY Cation efflux protein transmembrane domain-like 52 251 IPR027469 -
Lal11g1545 343 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 254 330 IPR036837 -
Lal11g1545 343 Pfam Dimerisation domain of Zinc Transporter 257 330 IPR027470 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1545 Lal-Chr11 18566930 18568865 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1545 11 18566930 18568865 Lal11g1545 11 18566930 18568865 ECH
Lal20g0501 20 4272624 4278118 Lal11g1545 11 18566930 18568865 LSH
Lal11g1545 11 18566930 18568865 Lal1g1514 1 17273530 17280463 LSH